UNKL (Tetraodon nigroviridis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTNIG00000018588 T03509_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000021762 CCCH ZF 70 93
ENSTNIP00000021762 CCCH ZF 276 301

Links

Other CCCH ZF family RBPs
Other Tetraodon nigroviridis RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
188708 Helobdella robusta 188708 N 0.706
AAEL012456 Aedes aegypti AAEL012456 N 0.824
AAH46725 Xenopus laevis AAH46725 N 0.824
AGAP000684 Anopheles gambiae AGAP000684 N 0.824
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.784
CBN08203 Caenorhabditis brenneri CBN08203 N 0.706
UNK Anolis carolinensis ENSACAG00000007303 N 0.804
UNKL Bos taurus ENSBTAG00000014126 N 0.808
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.804
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.804
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.846
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.804
UNKL Cavia porcellus ENSCPOG00000011846 N 0.882
UNK Cavia porcellus ENSCPOG00000012679 N 0.804
unk Danio rerio ENSDARG00000000935 N 0.765
UNKL Danio rerio ENSDARG00000037838 N 0.922
Unk Dipodomys ordii ENSDORG00000008133 N 0.804
LOC100067623 Equus caballus ENSECAG00000010641 N 0.827
UNK Equus caballus ENSECAG00000024672 N 0.804
UNK Felis catus ENSFCAG00000005757 N 0.843
UNKL Homo sapiens ENSG00000059145 N 0.827
UNK Homo sapiens ENSG00000132478 N 0.804
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.808
UNK Gallus gallus ENSGALG00000002278 N 0.804
UNKL Gallus gallus ENSGALG00000006450 N 0.902
UNK Gorilla gorilla ENSGGOG00000009203 N 0.804
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.827
UNKL Loxodonta africana ENSLAFG00000018262 N 0.863
UNK Loxodonta africana ENSLAFG00000022662 N 0.804
UNK Macropus eugenii ENSMEUG00000004094 N 0.824
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.804
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.902
UNK Myotis lucifugus ENSMLUG00000015453 N 0.804
UNK Macaca mulatta ENSMMUG00000013646 N 0.804
UNK Monodelphis domestica ENSMODG00000007684 N 0.824
UNKL Monodelphis domestica ENSMODG00000016188 N 0.902
Unkl Mus musculus ENSMUSG00000015127 N 0.843
Unk Mus musculus ENSMUSG00000020770 N 0.784
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.804
UNK Ochotona princeps ENSOPRG00000012784 N 0.725
UNKL Oryzias latipes ENSORLG00000005070 N 0.922
UNK Procavia capensis ENSPCAG00000004504 N 0.804
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.808
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.804
UNK Pan troglodytes ENSPTRG00000009656 N 0.804
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.804
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.784
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.863
UNK Sus scrofa ENSSSCG00000017201 N 0.804
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.804
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.804
UNK Takifugu rubripes ENSTRUG00000007192 N 0.784
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.980
UNK Tursiops truncatus ENSTTRG00000015890 N 0.804
unk Xenopus tropicalis ENSXETG00000012578 N 0.804
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.843
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.765
PHUM219250 Pediculus humanus PHUM219250 N 0.804
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.784