UNK (Gasterosteus aculeatus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSGACG00000005102 T02683_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000006736 CCCH ZF 109 133
ENSGACP00000006736 CCCH ZF 315 341

Links

Other CCCH ZF family RBPs
Other Gasterosteus aculeatus RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
UNK Takifugu rubripes ENSTRUG00000007192 N 0.942
UNK Felis catus ENSFCAG00000005757 N 0.904
AAH46725 Xenopus laevis AAH46725 N 0.904
Unk Dipodomys ordii ENSDORG00000008133 N 0.885
UNK Procavia capensis ENSPCAG00000004504 N 0.885
UNK Equus caballus ENSECAG00000024672 N 0.885
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.885
UNK Pan troglodytes ENSPTRG00000009656 N 0.885
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.885
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.885
UNK Sus scrofa ENSSSCG00000017201 N 0.885
unk Xenopus tropicalis ENSXETG00000012578 N 0.885
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.885
UNK Cavia porcellus ENSCPOG00000012679 N 0.885
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.885
UNK Homo sapiens ENSG00000132478 N 0.885
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.885
UNK Loxodonta africana ENSLAFG00000022662 N 0.885
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.885
UNK Gorilla gorilla ENSGGOG00000009203 N 0.885
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.885
UNK Macropus eugenii ENSMEUG00000004094 N 0.885
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.885
UNK Monodelphis domestica ENSMODG00000007684 N 0.885
UNK Macaca mulatta ENSMMUG00000013646 N 0.885
UNK Myotis lucifugus ENSMLUG00000015453 N 0.885
UNK Anolis carolinensis ENSACAG00000007303 N 0.885
UNK Gallus gallus ENSGALG00000002278 N 0.885
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.865
UNK Tursiops truncatus ENSTTRG00000015890 N 0.865
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.865
Unk Mus musculus ENSMUSG00000020770 N 0.865
UNKL Monodelphis domestica ENSMODG00000016188 N 0.865
unk Danio rerio ENSDARG00000000935 N 0.846
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.846
UNKL Cavia porcellus ENSCPOG00000011846 N 0.846
UNKL Loxodonta africana ENSLAFG00000018262 N 0.846
UNKL Danio rerio ENSDARG00000037838 N 0.846
UNKL Oryzias latipes ENSORLG00000005070 N 0.846
UNKL Homo sapiens ENSG00000059145 N 0.846
LOC100067623 Equus caballus ENSECAG00000010641 N 0.846
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.827
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.827
UNKL Gallus gallus ENSGALG00000006450 N 0.827
UNKL Bos taurus ENSBTAG00000014126 N 0.827
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.827
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.827
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.827
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.808
AGAP000684 Anopheles gambiae AGAP000684 N 0.808
UNK Ochotona princeps ENSOPRG00000012784 N 0.808
AAEL012456 Aedes aegypti AAEL012456 N 0.808
Unkl Mus musculus ENSMUSG00000015127 N 0.808
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.788
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.788
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.750
PHUM219250 Pediculus humanus PHUM219250 N 0.750