Scas_Contig578.9 (Saccharomyces castellii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Scas_Contig578.9 T05829_0.6 SGD (2003-Oct-3)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig578.9 CCCH ZF 90 115

Links

Other CCCH ZF family RBPs
Other Saccharomyces castellii RBPs

85 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
20338_Multiple Saccharomyces mikatae 20338_Multiple N 0.769
20661_YOR091W Saccharomyces paradoxus 20661_YOR091W N 0.769
22901_YOR091W Saccharomyces bayanus 22901_YOR091W N 0.769
A7TLF2_VANPO Vanderwaltozyma polyspora A7TLF2_VANPO N 0.885
AAH77826 Xenopus laevis AAH77826 N 0.731
AB07703.1 Alternaria brassicicola AB07703.1 N 0.769
ACL082W Ashbya gossypii ACL082W N 0.846
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.731
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.731
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.731
BAD89267 Xenopus laevis BAD89267 N 0.731
BGIBMGA011604 Bombyx mori BGIBMGA011604 N 0.731
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.731
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.731
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.731
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.885
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.731
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.731
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.731
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.731
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.731
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.731
LOC100068634 Equus caballus ENSECAG00000017149 N 0.731
ZC3H15 Felis catus ENSFCAG00000008213 N 0.731
ZC3H15 Homo sapiens ENSG00000065548 N 0.731
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.731
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.731
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.731
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.731
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.731
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.731
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.731
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.731
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.731
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.731
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.731
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.731
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.731
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.731
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.731
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.731
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.731
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.731
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.731
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.731
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.731
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.731
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.731
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.731
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.731
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.731
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.731
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.808
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.731
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.808
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.731
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.769
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.731
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.731
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.731
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.731
GD10149 Drosophila simulans FBgn0181924 N 0.731
GK21573 Drosophila willistoni FBgn0223565 N 0.731
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.731
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.808
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.769
Kwal_2969 Kluyveromyces waltii Kwal_2969 N 0.769
MCYG_02954 Microsporum canis MCYG_02954 N 0.731
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.769
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.731
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.731
NCU01795 Neurospora crassa NCU01795 N 0.808
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.769
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.731
Q6DD06 Xenopus laevis Q6DD06 N 0.731
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.808
SPPG_00188 Spizellomyces punctatus SPPG_00188 N 0.731
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.731
TERG_01412 Trichophyton rubrum TERG_01412 N 0.731
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.731
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.731
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.731
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.731
TMA46 Saccharomyces cerevisiae YOR091W N 0.769
ZYRO0C15598g Zygosaccharomyces rouxii ZYRO0C15598g N 0.769