CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZYRO0C15598g
(
Zygosaccharomyces rouxii
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ZYRO0C15598g
T06682_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZYRO0C15598g
CCCH ZF
86
111
PKSVVCVMFKMGNCNKGSKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Zygosaccharomyces rouxii
RBPs
99 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CAGL0J08679g
Candida glabrata
CAGL0J08679g
N
0.846
ZC3H15
Pan troglodytes
ENSPTRG00000012717
N
0.769
ENSPPYG00000013004
Pongo pygmaeus
ENSPPYG00000013004
N
0.769
ZC3H15
Procavia capensis
ENSPCAG00000008499
N
0.769
ENSOPRG00000015790
Ochotona princeps
ENSOPRG00000015790
N
0.769
ZC3H15
Pteropus vampyrus
ENSPVAG00000004828
N
0.769
ZC3H15
Otolemur garnettii
ENSOGAG00000002182
N
0.769
ZC3H15
Sus scrofa
ENSSSCG00000016026
N
0.769
ZC3H15
Sorex araneus
ENSSARG00000012071
N
0.769
Zc3h15
Rattus norvegicus
ENSRNOG00000005256
N
0.769
ZC3H15
Spermophilus tridecemlineatus
ENSSTOG00000006873
N
0.769
ENSOCUG00000011903
Oryctolagus cuniculus
ENSOCUG00000011903
N
0.769
ZC3H15
Microcebus murinus
ENSMICG00000014245
N
0.769
ZC3H15
Meleagris gallopavo
ENSMGAG00000004447
N
0.769
ENSLAFG00000001563
Loxodonta africana
ENSLAFG00000001563
N
0.769
ZC3H15
Myotis lucifugus
ENSMLUG00000007741
N
0.769
ZC3H15
Macaca mulatta
ENSMMUG00000017248
N
0.769
ZC3H15
Ornithorhynchus anatinus
ENSOANG00000015742
N
0.769
AAH77826
Xenopus laevis
AAH77826
N
0.769
ITGAV
Monodelphis domestica
ENSMODG00000010653
N
0.769
ZC3H15
Tupaia belangeri
ENSTBEG00000015530
N
0.769
ZC3H15
Taeniopygia guttata
ENSTGUG00000011131
N
0.769
ACL082W
Ashbya gossypii
ACL082W
N
0.769
A7TLF2_VANPO
Vanderwaltozyma polyspora
A7TLF2_VANPO
N
0.769
Scas_Contig578.9
Saccharomyces castellii
Scas_Contig578.9
N
0.769
Ame_R017931
Ailuropoda melanoleuca
Ame_R017931
N
0.769
Kwal_2969
Kluyveromyces waltii
Kwal_2969
N
0.769
XP_002158150.1
Hydra magnipapillata
XP_002158150.1
N
0.769
SAKL0E09966g
Lachancea kluyveri
SAKL0E09966g
N
0.769
Minc08580
Meloidogyne incognita
Minc08580
N
0.769
gw1.1.348.1
Phycomyces blakesleeanus
gw1.1.348.1
N
0.769
estExt_gwp.C_6160004
Branchiostoma floridae
estExt_gwp.C_6160004
N
0.769
ZC3H15
Vicugna pacos
ENSVPAG00000006980
N
0.769
ZC3H15
Tursiops truncatus
ENSTTRG00000012425
N
0.769
ZC3H15
Tarsius syrichta
ENSTSYG00000011019
N
0.769
GD10149
Drosophila simulans
FBgn0181924
N
0.769
GK21573
Drosophila willistoni
FBgn0223565
N
0.769
estExt_Genewise1.C_110154
Neurospora discreta
estExt_Genewise1.C_110154
N
0.769
estExt_fgenesh1_pm.C_130118
Neurospora tetrasperma
estExt_fgenesh1_pm.C_130118
N
0.769
NCU01795
Neurospora crassa
NCU01795
N
0.769
ZC3H15
Gorilla gorilla
ENSGGOG00000000073
N
0.769
Zc3h15
Mus musculus
ENSMUSG00000027091
N
0.769
MCYG_02954
Microsporum canis
MCYG_02954
N
0.769
nasonia_NCBI_hmm1144383
Nasonia vitripennis
nasonia_NCBI_hmm1144383
N
0.769
DGIL_AUG5s16g7t1
Acyrtosiphon pisum
DGIL_AUG5s16g7t1
N
0.769
ZC3HF_BOVIN
Bos taurus
ENSBTAG00000021762
N
0.769
ZC3H15
Canis familiaris
ENSCAFG00000014494
N
0.769
TRV_03417
Trichophyton verrucosum
TRV_03417
N
0.769
MGYG_00125
Microsporum gypseum
MGYG_00125
N
0.769
TERG_01412
Trichophyton rubrum
TERG_01412
N
0.769
ZC3HF_CHICK
Gallus gallus
ENSGALG00000002670
N
0.769
ATEG_06133
Aspergillus terreus
CADATEAG00002525
N
0.769
TEQG_08385
Trichophyton equinum
TEQG_08385
N
0.769
TESG_03135
Trichophyton tonsurans
TESG_03135
N
0.769
amel4_ncbi_hmm11607
Apis mellifera
amel4_ncbi_hmm11607
N
0.769
ENSETEG00000015556
Echinops telfairi
ENSETEG00000015556
N
0.769
LOC100068634
Equus caballus
ENSECAG00000017149
N
0.769
ZC3H15
Felis catus
ENSFCAG00000008213
N
0.769
ZC3H15
Homo sapiens
ENSG00000065548
N
0.769
BAD89267
Xenopus laevis
BAD89267
N
0.769
Zc3h15
Dipodomys ordii
ENSDORG00000011664
N
0.769
Q6DD06
Xenopus laevis
Q6DD06
N
0.769
ARB_01723
Arthroderma benhamiae
ARB_01723
N
0.769
ZC3H15
Callithrix jacchus
ENSCJAG00000005931
N
0.769
ZC3H15
Choloepus hoffmanni
ENSCHOG00000011958
N
0.769
ENSCPOG00000012965
Cavia porcellus
ENSCPOG00000012965
N
0.769
Aqu1.222312
Amphimedon queenslandica
Aqu1.222312
N
0.731
estExt_Genewise1.C_60471
Cochliobolus heterostrophus C5
estExt_Genewise1.C_60471
N
0.731
WUBG_13399
Wuchereria bancrofti
WUBG_13399
N
0.731
LOAG_00784
Loa loa
LOAG_00784
N
0.731
KLTH0G08162g
Kluyveromyces thermotolerans
KLTH0G08162g
N
0.731
Bm1_13920
Brugia malayi
Bm1_13920
N
0.731
Pa_3_8730
Podospora anserina
Pa_3_8730
N
0.731
72073
Helobdella robusta
72073
N
0.731
MGG_07010
Magnaporthe oryzae
MGG_07010
N
0.731
BGIBMGA011604
Bombyx mori
BGIBMGA011604
N
0.731
AB07703.1
Alternaria brassicicola
AB07703.1
N
0.731
gw1.233.15.1
Physcomitrella patens
gw1.233.15.1
N
0.731
BGIOSIBCE004176
Oryza indica
BGIOSIBCE004176
N
0.731
ZC3H15
Anolis carolinensis
ENSACAG00000001916
N
0.731
CRE20408
Caenorhabditis remanei
CRE20408
N
0.731
CJA17052
Caenorhabditis japonica
CJA17052
N
0.731
RGD1564243
Rattus norvegicus
ENSRNOG00000015276
N
0.731
ZC3H15
Oryzias latipes
ENSORLG00000018606
N
0.731
ENSOCUG00000011909
Oryctolagus cuniculus
ENSOCUG00000011909
N
0.731
ZC3H15
Gasterosteus aculeatus
ENSGACG00000011648
N
0.731
ZC3H15
Dasypus novemcinctus
ENSDNOG00000018840
N
0.731
zc3h15
Danio rerio
ENSDARG00000015889
N
0.731
CBN11546
Caenorhabditis brenneri
CBN11546
N
0.731
CBN03898
Caenorhabditis brenneri
CBN03898
N
0.731
zc3h15
Xenopus tropicalis
ENSXETG00000013336
N
0.731
F27D4.4
Caenorhabditis elegans
F27D4.4
N
0.731
LOC_Os01g61830
Oryza sativa
LOC_Os01g61830
N
0.731
ACLA_016930
Aspergillus clavatus
CADACLAG00000891
N
0.731
AFUA_5G13930
Aspergillus fumigatus
CADAFUAG00006431
N
0.731
CBG00292
Caenorhabditis briggsae
CBG00292
N
0.731
NFIA_073040
Neosartorya fischeri
CADNFIAG00007899
N
0.731
ZC3H15
Takifugu rubripes
ENSTRUG00000004988
N
0.731
SB03G039020
Sorghum bicolor
Sb03g039020
N
0.731