CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H15
(
Homo sapiens
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSG00000065548
T02629_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000338788
CCCH ZF
100
125
PKSVVCAFFKQGQCTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Homo sapiens
RBPs
144 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZC3H15
Taeniopygia guttata
ENSTGUG00000011131
N
1.000
ZC3HF_BOVIN
Bos taurus
ENSBTAG00000021762
N
1.000
ZC3H15
Tarsius syrichta
ENSTSYG00000011019
N
1.000
ZC3H15
Tursiops truncatus
ENSTTRG00000012425
N
1.000
ZC3H15
Tupaia belangeri
ENSTBEG00000015530
N
1.000
ZC3H15
Spermophilus tridecemlineatus
ENSSTOG00000006873
N
1.000
Q6DD06
Xenopus laevis
Q6DD06
N
1.000
ZC3H15
Sorex araneus
ENSSARG00000012071
N
1.000
ZC3H15
Sus scrofa
ENSSSCG00000016026
N
1.000
ZC3H15
Vicugna pacos
ENSVPAG00000006980
N
1.000
ZC3H15
Canis familiaris
ENSCAFG00000014494
N
1.000
AAH77826
Xenopus laevis
AAH77826
N
1.000
Zc3h15
Dipodomys ordii
ENSDORG00000011664
N
1.000
ENSCPOG00000012965
Cavia porcellus
ENSCPOG00000012965
N
1.000
LOC100068634
Equus caballus
ENSECAG00000017149
N
1.000
BAD89267
Xenopus laevis
BAD89267
N
1.000
ZC3H15
Felis catus
ENSFCAG00000008213
N
1.000
ZC3H15
Choloepus hoffmanni
ENSCHOG00000011958
N
1.000
ZC3H15
Callithrix jacchus
ENSCJAG00000005931
N
1.000
Zc3h15
Rattus norvegicus
ENSRNOG00000005256
N
1.000
ZC3H15
Pteropus vampyrus
ENSPVAG00000004828
N
1.000
ZC3H15
Macaca mulatta
ENSMMUG00000017248
N
1.000
ITGAV
Monodelphis domestica
ENSMODG00000010653
N
1.000
Zc3h15
Mus musculus
ENSMUSG00000027091
N
1.000
ZC3H15
Myotis lucifugus
ENSMLUG00000007741
N
1.000
ZC3H15
Microcebus murinus
ENSMICG00000014245
N
1.000
ZC3HF_CHICK
Gallus gallus
ENSGALG00000002670
N
1.000
ZC3H15
Gorilla gorilla
ENSGGOG00000000073
N
1.000
ZC3H15
Meleagris gallopavo
ENSMGAG00000004447
N
1.000
ZC3H15
Ornithorhynchus anatinus
ENSOANG00000015742
N
1.000
ENSOCUG00000011903
Oryctolagus cuniculus
ENSOCUG00000011903
N
1.000
ZC3H15
Procavia capensis
ENSPCAG00000008499
N
1.000
ENSPPYG00000013004
Pongo pygmaeus
ENSPPYG00000013004
N
1.000
ZC3H15
Pan troglodytes
ENSPTRG00000012717
N
1.000
Ame_R017931
Ailuropoda melanoleuca
Ame_R017931
N
1.000
ENSOPRG00000015790
Ochotona princeps
ENSOPRG00000015790
N
1.000
nasonia_NCBI_hmm1144383
Nasonia vitripennis
nasonia_NCBI_hmm1144383
N
1.000
ZC3H15
Otolemur garnettii
ENSOGAG00000002182
N
1.000
amel4_ncbi_hmm11607
Apis mellifera
amel4_ncbi_hmm11607
N
1.000
ZC3H15
Anolis carolinensis
ENSACAG00000001916
N
0.962
zc3h15
Danio rerio
ENSDARG00000015889
N
0.962
ZC3H15
Gasterosteus aculeatus
ENSGACG00000011648
N
0.962
GD10149
Drosophila simulans
FBgn0181924
N
0.962
ZC3H15
Oryzias latipes
ENSORLG00000018606
N
0.962
RGD1564243
Rattus norvegicus
ENSRNOG00000015276
N
0.962
zc3h15
Xenopus tropicalis
ENSXETG00000013336
N
0.962
ZC3H15
Takifugu rubripes
ENSTRUG00000004988
N
0.962
ENSOCUG00000011909
Oryctolagus cuniculus
ENSOCUG00000011909
N
0.962
ZC3H15
Dasypus novemcinctus
ENSDNOG00000018840
N
0.962
ENSLAFG00000001563
Loxodonta africana
ENSLAFG00000001563
N
0.962
GK21573
Drosophila willistoni
FBgn0223565
N
0.962
ZC3H15
Tetraodon nigroviridis
ENSTNIG00000009860
N
0.923
estExt_gwp.C_6160004
Branchiostoma floridae
estExt_gwp.C_6160004
N
0.923
BGIBMGA011604
Bombyx mori
BGIBMGA011604
N
0.923
72073
Helobdella robusta
72073
N
0.923
ENSETEG00000015556
Echinops telfairi
ENSETEG00000015556
N
0.885
DGIL_AUG5s16g7t1
Acyrtosiphon pisum
DGIL_AUG5s16g7t1
N
0.885
estExt_Genewise1Plus.C_sca_2280007
Lottia gigantea
estExt_Genewise1Plus.C_sca_2280007
N
0.885
e_gw.53.202.1
Nematostella vectensis
e_gw.53.202.1
N
0.885
Minc08580
Meloidogyne incognita
Minc08580
N
0.846
ENSCING00000006888
Ciona intestinalis
ENSCING00000006888
N
0.846
Aqu1.222312
Amphimedon queenslandica
Aqu1.222312
N
0.846
PHUM521160
Pediculus humanus
PHUM521160
N
0.846
ppa007639m
Prunus persica
ppa007639m
N
0.808
EFA82915.1
Polysphondylium pallidum
EFA82915.1
N
0.808
PK12342.1
Cannabis sativa
PK12342.1
N
0.808
Bm1_13920
Brugia malayi
Bm1_13920
N
0.808
CPAG_03559
Candida parapsilosis
CPAG_03559
N
0.808
LOAG_00784
Loa loa
LOAG_00784
N
0.808
PITG_04608
Phytophthora infestans
PITG_04608
N
0.808
WUBG_13399
Wuchereria bancrofti
WUBG_13399
N
0.808
MDP0000161236
Malus x domestica
MDP0000161236
N
0.808
SB03G039020
Sorghum bicolor
Sb03g039020
N
0.808
XP_002158150.1
Hydra magnipapillata
XP_002158150.1
N
0.808
LOC_Os01g61830
Oryza sativa
LOC_Os01g61830
N
0.808
ZC3H15
Oryctolagus cuniculus
ENSOCUG00000027731
N
0.808
PASA_GEN_1200032
Daphnia pulex
PASA_GEN_1200032
N
0.808
Glyma03g33420.1
Glycine max
Glyma03g33420.1
N
0.808
BGIOSIBCE004176
Oryza indica
BGIOSIBCE004176
N
0.808
gw1.233.15.1
Physcomitrella patens
gw1.233.15.1
N
0.808
Glyma19g36150.1
Glycine max
Glyma19g36150.1
N
0.808
CRE20408
Caenorhabditis remanei
CRE20408
N
0.769
ZYRO0C15598g
Zygosaccharomyces rouxii
ZYRO0C15598g
N
0.769
AT2G20280
Arabidopsis thaliana
AT2G20280-TAIR-G
N
0.769
CJA17052
Caenorhabditis japonica
CJA17052
N
0.769
CBN11546
Caenorhabditis brenneri
CBN11546
N
0.769
SPPG_00188
Spizellomyces punctatus
SPPG_00188
N
0.769
ATEG_06133
Aspergillus terreus
CADATEAG00002525
N
0.769
CBG00292
Caenorhabditis briggsae
CBG00292
N
0.769
CBN03898
Caenorhabditis brenneri
CBN03898
N
0.769
BRADI2G54220
Brachypodium distachyon
BRADI2G54220
N
0.769
GRMZM2G032258
Zea mays
GRMZM2G032258
N
0.769
estExt_Genewise1.C_110154
Neurospora discreta
estExt_Genewise1.C_110154
N
0.769
estExt_fgenesh1_pm.C_130118
Neurospora tetrasperma
estExt_fgenesh1_pm.C_130118
N
0.769
e_gw1.3.744.1
Selaginella moellendorfii
e_gw1.3.744.1
N
0.769
fgeneshTA2_pg.C_scaffold_15000146
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_15000146
N
0.769
Glyma10g05550.1
Glycine max
Glyma10g05550.1
N
0.769
CAGL0J08679g
Candida glabrata
CAGL0J08679g
N
0.769
gwh2.4.391.1
Phanerochaete chrysosporium
gwh2.4.391.1
N
0.769
e_gw1.2.668.1
Sporobolomyces roseus
e_gw1.2.668.1
N
0.769
29805.m001499
Ricinus communis
29805.m001499
N
0.769
XM_002883888.1
Arabidopsis lyrata
fgenesh2_kg.3__3143__AT2G20280.1
N
0.769
F27D4.4
Caenorhabditis elegans
F27D4.4
N
0.769
NCU01795
Neurospora crassa
NCU01795
N
0.769
POPTR_0006s13510
Populus trichocarpa
POPTR_0006s13510
N
0.769
B9MT73_POPTR
Populus trichocarpa
POPTR_0308s00200
N
0.769
B9HM02_POPTR
Populus trichocarpa
POPTR_0008s04540
N
0.769
chr5.LjT08O17.30.nd
Lotus japonicus
chr5.LjT08O17.30.nd
N
0.769
s_451242
Phytophthora sojae
s_451242
N
0.769
PDK_20s1366191g001
Phoenix dactylifera
PDK_20s1366191g001
N
0.769
e_gw1.8.939.1
Pleurotus ostreatus
e_gw1.8.939.1
N
0.769
PMAA_036360
Penicillium marneffei
PMAA_036360
N
0.769
fgenesh1_pg.C_scaffold_3139000003
Phytophthora capsici
fgenesh1_pg.C_scaffold_3139000003
N
0.731
cassava3130.m1
Manihot esculenta
cassava3130.m1
N
0.731
CTRG_02162
Candida tropicalis
CTRG_02162
N
0.731
estExt_fgenesh1_pm.C_180201
Phytophthora capsici
estExt_fgenesh1_pm.C_180201
N
0.731
estExt_Genewise1.C_60471
Cochliobolus heterostrophus C5
estExt_Genewise1.C_60471
N
0.731
cassava28858.valid.m1
Manihot esculenta
cassava28858.valid.m1
N
0.731
DEHA0A09449g
Debaryomyces hansenii
DEHA0A09449g
N
0.731
CAOG_04504
Capsaspora owczarzaki
CAOG_04504
N
0.731
Pc21g03130
Penicillium chrysogenum
Pc21g03130
N
0.731
GSVIVG00016357001
Vitis vinifera
GSVIVG00016357001
N
0.731
ARB_01723
Arthroderma benhamiae
ARB_01723
N
0.731
Pa_3_8730
Podospora anserina
Pa_3_8730
N
0.731
CC1G_07829
Coprinopsis cinerea
CC1G_07829
N
0.731
estExt_Genewise1Plus.C_31385
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_31385
N
0.731
cassava28857.valid.m1
Manihot esculenta
cassava28857.valid.m1
N
0.731
MCYG_02954
Microsporum canis
MCYG_02954
N
0.731
A7TLF2_VANPO
Vanderwaltozyma polyspora
A7TLF2_VANPO
N
0.731
Scas_Contig578.9
Saccharomyces castellii
Scas_Contig578.9
N
0.731
ppa007903m
Prunus persica
ppa007903m
N
0.731
AB07703.1
Alternaria brassicicola
AB07703.1
N
0.731
TRV_03417
Trichophyton verrucosum
TRV_03417
N
0.731
TERG_01412
Trichophyton rubrum
TERG_01412
N
0.731
TESG_03135
Trichophyton tonsurans
TESG_03135
N
0.731
MGYG_00125
Microsporum gypseum
MGYG_00125
N
0.731
gw1.1.348.1
Phycomyces blakesleeanus
gw1.1.348.1
N
0.731
MGG_07010
Magnaporthe oryzae
MGG_07010
N
0.731
NFIA_073040
Neosartorya fischeri
CADNFIAG00007899
N
0.731
ANIA_06922
Aspergillus nidulans
CADANIAG00007728
N
0.731
AFUA_5G13930
Aspergillus fumigatus
CADAFUAG00006431
N
0.731
Glyma13g19900.1
Glycine max
Glyma13g19900.1
N
0.731
ACLA_016930
Aspergillus clavatus
CADACLAG00000891
N
0.731
TEQG_08385
Trichophyton equinum
TEQG_08385
N
0.731