MDP0000588193 (Malus x domestica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 MDP0000588193 T06382_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000588193 CCCH ZF 248 270

Links

Other CCCH ZF family RBPs
Other Malus x domestica RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
63792 Aureococcus anophagefferens 63792 N 0.000
AT1G54930 Arabidopsis thaliana AT1G54930-TAIR-G N 0.000
estExt_fgenesh4_pg.C_270089 Volvox carteri estExt_fgenesh4_pg.C_270089 N 0.000
XM_002894567.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003658 N 0.000
fgeneshEH_pg.19__19 Emiliania huxleyi fgeneshEH_pg.19__19 N 0.000
LOC_Os03g20690 Oryza sativa LOC_Os03g20690 N 0.000
LOC_Os04g04120 Oryza sativa LOC_Os04g04120 N 0.000
LOC_Os04g06220 Oryza sativa LOC_Os04g06220 N 0.000
LOC_Os05g49600 Oryza sativa LOC_Os05g49600 N 0.000
LOC_Os08g39174 Oryza sativa LOC_Os08g39174 N 0.000
LOC_Os12g25080 Oryza sativa LOC_Os12g25080 N 0.000
LOC_Os12g39190 Oryza sativa LOC_Os12g39190 N 0.000
Medtr1g103590 Medicago truncatula Medtr1g103590 N 0.000