LOC_Os03g23140 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os03g23140 T11005_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g23140.1 CCHC ZF 100 117
LOC_Os03g23140.1 CCHC ZF 191 208
LOC_Os03g23140.1 CCHC ZF 227 243
LOC_Os03g23140.1 CCHC ZF 299 316

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL009235 Aedes aegypti AAEL009235 N 0.000
AGAP005641 Anopheles gambiae AGAP005641 N 0.000
CPIJ008535 Culex quinquefasciatus CPIJ008535 N 0.000
CpipJ_CPIJ008535 Culex pipiens CpipJ_CPIJ008535 N 0.000
CG9705 Drosophila melanogaster FBgn0036661 N 0.000
GF23931 Drosophila ananassae FBgn0100925 N 0.000
GG13577 Drosophila erecta FBgn0105847 N 0.000
GH16224 Drosophila grimshawi FBgn0123695 N 0.000
GI13370 Drosophila mojavensis FBgn0136127 N 0.000
GL20690 Drosophila persimilis FBgn0158285 N 0.000
GM25657 Drosophila sechellia FBgn0180514 N 0.000
GD14664 Drosophila simulans FBgn0186342 N 0.000
GJ13199 Drosophila virilis FBgn0200425 N 0.000
GK16809 Drosophila willistoni FBgn0218809 N 0.000
GE19874 Drosophila yakuba FBgn0237204 N 0.000