CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GM25657
(
Drosophila sechellia
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
FBgn0180514
T17096_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0207134
CSD
54
121
VVTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDIEGEYVPMPGDEVKYRLCAIPPKYEKHQAVHVQIS
Links
Other
CSD
family RBPs
Other
Drosophila sechellia
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD14664
Drosophila simulans
FBgn0186342
N
1.000
CG9705
Drosophila melanogaster
FBgn0036661
N
1.000
GG13577
Drosophila erecta
FBgn0105847
N
0.971
GE19874
Drosophila yakuba
FBgn0237204
N
0.971
GF23931
Drosophila ananassae
FBgn0100925
N
0.956
GK16809
Drosophila willistoni
FBgn0218809
N
0.956
GL20690
Drosophila persimilis
FBgn0158285
N
0.941
GA21978-RA
Drosophila pseudoobscura
FBgn0081963
N
0.941
GJ13199
Drosophila virilis
FBgn0200425
N
0.926
GI13370
Drosophila mojavensis
FBgn0136127
N
0.912
GH16224
Drosophila grimshawi
FBgn0123695
N
0.912
AGAP005641
Anopheles gambiae
AGAP005641
N
0.779
PHUM557470
Pediculus humanus
PHUM557470
N
0.706