LOC_Os06g18090 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g18090 T11597_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g18090.1 CCHC ZF 291 308

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

306 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70969 Xenopus laevis AAH70969 I 0.000
AAH77770 Xenopus laevis AAH77770 I 0.000
AAI10708 Xenopus laevis AAI10708 I 0.000
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.000
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.000
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.000
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.000
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.000
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.000
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.000
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.000
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.000
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.000
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.000
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.000
ENSCJAG00000008291 Callithrix jacchus ENSCJAG00000008291 I 0.000
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.000
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.000
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.000
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.000
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.000
hnrnph1l Danio rerio ENSDARG00000005551 I 0.000
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.000
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.000
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.000
LOC100050002 Equus caballus ENSECAG00000003229 I 0.000
LOC100067495 Equus caballus ENSECAG00000014429 I 0.000
LOC100057665 Equus caballus ENSECAG00000023575 I 0.000
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.000
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.000
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.000
HNRNPF Felis catus ENSFCAG00000006794 N 0.000
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.000
HNRNPH2 Homo sapiens ENSG00000126945 D 0.000
HNRNPH1 Homo sapiens ENSG00000169045 I 0.000
HNRNPF Homo sapiens ENSG00000169813 I 0.000
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.000
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.000
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.000
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.000
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.000
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.000
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.000
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.000
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.000
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.000
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.000
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.000
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.000
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.000
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.000
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.000
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.000
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.000
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.000
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.000
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.000
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.000
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.000
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.000
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.000
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.000
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.000
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.000
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.000
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.000
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.000
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.000
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.000
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.000
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.000
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.000
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.000
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.000
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.000
HNRNPH1 Pteropus vampyrus ENSPVAG00000007670 I 0.000
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.000
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.000
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.000
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.000
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.000
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.000
HNRNPF Sorex araneus ENSSARG00000010059 I 0.000
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.000
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.000
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.000
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.000
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.000
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.000
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.000
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.000
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.000
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.000
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.000
HNRNPH1 Vicugna pacos ENSVPAG00000007485 I 0.000
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.000