LOC_Os06g31750 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g31750 T11654_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g31750.1 CCHC ZF 132 148
LOC_Os06g31750.1 CCHC ZF 304 321
LOC_Os06g31750.1 CCHC ZF 340 356

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm34588 Apis mellifera amel4_ncbi_hmm34588 N 0.000
RBM22 Anolis carolinensis ENSACAG00000014750 N 0.000
RBM22_BOVIN Bos taurus ENSBTAG00000030366 N 0.000
RBM22_BOVIN Bos taurus ENSBTAG00000035397 N 0.000
RBM22 Canis familiaris ENSCAFG00000018082 N 0.000
ENSCHOG00000004192 Choloepus hoffmanni ENSCHOG00000004192 N 0.000
ENSCHOG00000013522 Choloepus hoffmanni ENSCHOG00000013522 N 0.000
RBM22 Callithrix jacchus ENSCJAG00000020963 N 0.000
RBM22 Cavia porcellus ENSCPOG00000001946 N 0.000
RBM22 Dasypus novemcinctus ENSDNOG00000011166 N 0.000
Rbm22 Dipodomys ordii ENSDORG00000005329 N 0.000
ENSEEUG00000005638 Erinaceus europaeus ENSEEUG00000005638 N 0.000
RBM22 Homo sapiens ENSG00000086589 N 0.000
RBM22_CHICK Gallus gallus ENSGALG00000004555 N 0.000
RBM22 Gorilla gorilla ENSGGOG00000012947 N 0.000
RBM22 Loxodonta africana ENSLAFG00000006638 N 0.000
RBM22 Meleagris gallopavo ENSMGAG00000006298 N 0.000
ENSMLUG00000003461 Myotis lucifugus ENSMLUG00000003461 N 0.000
RBM22 Macaca mulatta ENSMMUG00000020683 N 0.000
Rbm22 Mus musculus ENSMUSG00000024604 N 0.000
RBM22 Oryctolagus cuniculus ENSOCUG00000011532 N 0.000
ENSOPRG00000008481 Ochotona princeps ENSOPRG00000008481 N 0.000
RBM22 Oryzias latipes ENSORLG00000004975 N 0.000
RBM22 Procavia capensis ENSPCAG00000015091 N 0.000
ENSPPYG00000015955 Pongo pygmaeus ENSPPYG00000015955 N 0.000
RBM22 Pan troglodytes ENSPTRG00000017423 N 0.000
RBM22 Pteropus vampyrus ENSPVAG00000014231 N 0.000
RBM22 Taeniopygia guttata ENSTGUG00000000850 N 0.000
RBM22 Tursiops truncatus ENSTTRG00000012778 N 0.000
estExt_fgenesh2_pm.C_1790010 Branchiostoma floridae estExt_fgenesh2_pm.C_1790010 N 0.000
e_gw1.11.24.1 Lottia gigantea e_gw1.11.24.1 N 0.000
CG14641 Drosophila melanogaster FBgn0037220 N 0.000
GA13140-RA Drosophila pseudoobscura FBgn0073177 N 0.000
GF17279 Drosophila ananassae FBgn0094297 N 0.000
GG11763 Drosophila erecta FBgn0104058 N 0.000
GL12337 Drosophila persimilis FBgn0149944 N 0.000
GM10722 Drosophila sechellia FBgn0165668 N 0.000
GD19696 Drosophila simulans FBgn0191187 N 0.000
GE25369 Drosophila yakuba FBgn0242446 N 0.000
gw.38.22.1 Branchiostoma floridae gw.38.22.1 N 0.000
ISCW021094 Ixodes scapularis ISCW021094 N 0.000