CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM22
(
Gorilla gorilla
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
ENSGGOG00000012947
T00527_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000012633
CCCH ZF
164
186
HICSFWVKGECKRGEECPYRHEK
ENSGGOP00000012633
RRM
235
300
LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLN
Links
Other
CCCH ZF,RRM
family RBPs
Other
Gorilla gorilla
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM22
Tursiops truncatus
ENSTTRG00000012778
N
1.000
ENSCHOG00000004192
Choloepus hoffmanni
ENSCHOG00000004192
N
1.000
ENSCHOG00000013522
Choloepus hoffmanni
ENSCHOG00000013522
N
1.000
RBM22
Pteropus vampyrus
ENSPVAG00000014231
N
1.000
RBM22
Anolis carolinensis
ENSACAG00000014750
N
1.000
ENSEEUG00000005638
Erinaceus europaeus
ENSEEUG00000005638
N
1.000
RBM22
Loxodonta africana
ENSLAFG00000006638
N
1.000
RBM22_BOVIN
Bos taurus
ENSBTAG00000030366
N
1.000
RBM22
Homo sapiens
ENSG00000086589
N
1.000
RBM22_BOVIN
Bos taurus
ENSBTAG00000035397
N
1.000
RBM22
Canis familiaris
ENSCAFG00000018082
N
1.000
ENSPPYG00000015955
Pongo pygmaeus
ENSPPYG00000015955
N
1.000
RBM22
Pan troglodytes
ENSPTRG00000017423
N
1.000
RBM22
Procavia capensis
ENSPCAG00000015091
N
1.000
RBM22
Dasypus novemcinctus
ENSDNOG00000011166
N
1.000
RBM22
Macaca mulatta
ENSMMUG00000020683
N
1.000
Rbm22
Dipodomys ordii
ENSDORG00000005329
N
1.000
RBM22
Cavia porcellus
ENSCPOG00000001946
N
1.000
Rbm22
Mus musculus
ENSMUSG00000024604
N
1.000
RBM22
Oryctolagus cuniculus
ENSOCUG00000011532
N
1.000
RBM22
Callithrix jacchus
ENSCJAG00000020963
N
1.000
ENSOPRG00000008481
Ochotona princeps
ENSOPRG00000008481
N
1.000
RBM22
Meleagris gallopavo
ENSMGAG00000006298
N
0.989
ENSCHOG00000001041
Choloepus hoffmanni
ENSCHOG00000001041
N
0.989
Rbm22
Rattus norvegicus
ENSRNOG00000019235
N
0.989
RBM22_CHICK
Gallus gallus
ENSGALG00000004555
N
0.989
RBM22
Taeniopygia guttata
ENSTGUG00000000850
N
0.989
ENSMLUG00000003461
Myotis lucifugus
ENSMLUG00000003461
N
0.978
RBM22
Monodelphis domestica
ENSMODG00000009574
N
0.978
rbm22
Xenopus tropicalis
ENSXETG00000020435
N
0.955
AAH45067
Xenopus laevis
AAH45067
N
0.944
Q7ZXB5
Xenopus laevis
Q7ZXB5
N
0.944
RBM22
Ornithorhynchus anatinus
ENSOANG00000002314
N
0.935
ENSMODG00000006398
Monodelphis domestica
ENSMODG00000006398
N
0.933
RBM22
Danio rerio
ENSDARG00000010238
N
0.867
RBM22
Oryzias latipes
ENSORLG00000004975
N
0.867
RBM22
Takifugu rubripes
ENSTRUG00000004724
N
0.856
ENSMEUG00000009348
Macropus eugenii
ENSMEUG00000009348
N
0.856
RBM22
Gasterosteus aculeatus
ENSGACG00000018027
N
0.856
RBM22
Vicugna pacos
ENSVPAG00000002066
N
0.820
gw.38.22.1
Branchiostoma floridae
gw.38.22.1
N
0.811
estExt_fgenesh2_pm.C_1790010
Branchiostoma floridae
estExt_fgenesh2_pm.C_1790010
N
0.811
e_gw1.462.21.1
Capitella teleta
e_gw1.462.21.1
N
0.758
amel4_ncbi_hmm34588
Apis mellifera
amel4_ncbi_hmm34588
N
0.744
PHUM268310
Pediculus humanus
PHUM268310
N
0.733
e_gw1.11.24.1
Lottia gigantea
e_gw1.11.24.1
N
0.733
ISCW021094
Ixodes scapularis
ISCW021094
N
0.722
gw.351.5.1
Nematostella vectensis
gw.351.5.1
N
0.700