e_gw1.11.24.1 (Lottia gigantea)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		e_gw1.11.24.1 T00865_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.11.24.1 CCCH ZF 162 184
e_gw1.11.24.1 RRM 233 298

Links

Other CCCH ZF,RRM family RBPs
Other Lottia gigantea RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Rbm22 Rattus norvegicus ENSRNOG00000019235 N 0.744
RBM22 Oryzias latipes ENSORLG00000004975 N 0.742
RBM22 Macaca mulatta ENSMMUG00000020683 N 0.733
RBM22 Monodelphis domestica ENSMODG00000009574 N 0.733
Rbm22 Mus musculus ENSMUSG00000024604 N 0.733
ENSMLUG00000003461 Myotis lucifugus ENSMLUG00000003461 N 0.733
RBM22 Meleagris gallopavo ENSMGAG00000006298 N 0.733
RBM22_CHICK Gallus gallus ENSGALG00000004555 N 0.733
RBM22 Loxodonta africana ENSLAFG00000006638 N 0.733
RBM22 Oryctolagus cuniculus ENSOCUG00000011532 N 0.733
ENSOPRG00000008481 Ochotona princeps ENSOPRG00000008481 N 0.733
RBM22 Pteropus vampyrus ENSPVAG00000014231 N 0.733
RBM22 Tursiops truncatus ENSTTRG00000012778 N 0.733
RBM22 Pan troglodytes ENSPTRG00000017423 N 0.733
ENSPPYG00000015955 Pongo pygmaeus ENSPPYG00000015955 N 0.733
RBM22 Homo sapiens ENSG00000086589 N 0.733
RBM22 Procavia capensis ENSPCAG00000015091 N 0.733
RBM22 Taeniopygia guttata ENSTGUG00000000850 N 0.733
RBM22 Gorilla gorilla ENSGGOG00000012947 N 0.733
RBM22_BOVIN Bos taurus ENSBTAG00000035397 N 0.733
RBM22 Canis familiaris ENSCAFG00000018082 N 0.733
ENSCHOG00000013522 Choloepus hoffmanni ENSCHOG00000013522 N 0.733
RBM22_BOVIN Bos taurus ENSBTAG00000030366 N 0.733
RBM22 Anolis carolinensis ENSACAG00000014750 N 0.733
AAH45067 Xenopus laevis AAH45067 N 0.733
Q7ZXB5 Xenopus laevis Q7ZXB5 N 0.733
RBM22 Callithrix jacchus ENSCJAG00000020963 N 0.733
ENSCHOG00000004192 Choloepus hoffmanni ENSCHOG00000004192 N 0.733
ENSEEUG00000005638 Erinaceus europaeus ENSEEUG00000005638 N 0.733
RBM22 Dasypus novemcinctus ENSDNOG00000011166 N 0.733
Rbm22 Dipodomys ordii ENSDORG00000005329 N 0.733
RBM22 Cavia porcellus ENSCPOG00000001946 N 0.733
gw.38.22.1 Branchiostoma floridae gw.38.22.1 N 0.730
gw.351.5.1 Nematostella vectensis gw.351.5.1 N 0.730
estExt_fgenesh2_pm.C_1790010 Branchiostoma floridae estExt_fgenesh2_pm.C_1790010 N 0.730
ENSMODG00000006398 Monodelphis domestica ENSMODG00000006398 N 0.722
rbm22 Xenopus tropicalis ENSXETG00000020435 N 0.722
ENSCHOG00000001041 Choloepus hoffmanni ENSCHOG00000001041 N 0.722
RBM22 Danio rerio ENSDARG00000010238 N 0.719
ISCW021094 Ixodes scapularis ISCW021094 N 0.719
RBM22 Takifugu rubripes ENSTRUG00000004724 N 0.719
RBM22 Gasterosteus aculeatus ENSGACG00000018027 N 0.708
ENSMEUG00000009348 Macropus eugenii ENSMEUG00000009348 N 0.708