LOC_Os07g15080 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g15080 T11752_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g15080.1 CCHC ZF 680 697

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
20338_Multiple Saccharomyces mikatae 20338_Multiple N 0.000
20661_YOR091W Saccharomyces paradoxus 20661_YOR091W N 0.000
22901_YOR091W Saccharomyces bayanus 22901_YOR091W N 0.000
A7TLF2_VANPO Vanderwaltozyma polyspora A7TLF2_VANPO N 0.000
AAH77826 Xenopus laevis AAH77826 N 0.000
AB07703.1 Alternaria brassicicola AB07703.1 N 0.000
ACL082W Ashbya gossypii ACL082W N 0.000
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.000
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.000
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.000
BAD89267 Xenopus laevis BAD89267 N 0.000
BGIBMGA011604 Bombyx mori BGIBMGA011604 N 0.000
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.000
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.000
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.000
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.000
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.000
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.000
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.000
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.000
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.000
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.000
LOC100068634 Equus caballus ENSECAG00000017149 N 0.000
ZC3H15 Felis catus ENSFCAG00000008213 N 0.000
ZC3H15 Homo sapiens ENSG00000065548 N 0.000
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.000
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.000
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.000
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.000
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.000
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.000
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.000
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.000
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.000
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.000
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.000
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.000
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.000
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.000
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.000
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.000
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.000
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.000
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.000
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.000
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.000
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.000
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.000
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.000
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.000
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.000
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.000
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.000
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.000
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.000
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.000
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.000
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.000
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.000
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.000
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.000
GD10149 Drosophila simulans FBgn0181924 N 0.000
GK21573 Drosophila willistoni FBgn0223565 N 0.000
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.000
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.000
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.000
Kwal_2969 Kluyveromyces waltii Kwal_2969 N 0.000
MCYG_02954 Microsporum canis MCYG_02954 N 0.000
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.000
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.000
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.000
NCU01795 Neurospora crassa NCU01795 N 0.000
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.000
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.000
Q6DD06 Xenopus laevis Q6DD06 N 0.000
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.000
SPPG_00188 Spizellomyces punctatus SPPG_00188 N 0.000
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.000
TERG_01412 Trichophyton rubrum TERG_01412 N 0.000
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.000
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.000
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.000
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.000
TMA46 Saccharomyces cerevisiae YOR091W N 0.000
ZYRO0C15598g Zygosaccharomyces rouxii ZYRO0C15598g N 0.000