LOC100056966 (Equus caballus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSECAG00000021541 T18714_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		1.000
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.857
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.776
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.776
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000018967 KH 61 141

Links

Other KH family RBPs
Other Equus caballus RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
0300010273 Ostreococcus tauri 0300010273 I 0.000
au.g10607_t1 Chlamydomonas reinhardtii au.g10607_t1 N 0.000
CC1G_04402 Coprinopsis cinerea CC1G_04402 N 0.000
EIN_295900 Entamoeba invadens EIN_295900 N 0.000
estExt_fgenesh1_pm.C_10824 Schizophyllum commune estExt_fgenesh1_pm.C_10824 N 0.000
estExt_fgenesh2_kg.C_10578 Serpula lacrymans estExt_fgenesh2_kg.C_10578 N 0.000
estExt_fgenesh2_pg.C_10793 Laccaria bicolor estExt_fgenesh2_pg.C_10793 N 0.000
estExt_fgenesh3_pg.C_770054 Postia placenta estExt_fgenesh3_pg.C_770054 N 0.000
estExt_genemark.C_30534 Pleurotus ostreatus estExt_genemark.C_30534 N 0.000
e_gw1.1.2331.1 Agaricus bisporus e_gw1.1.2331.1 N 0.000
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.000
fgenesh1_pg.C_scaffold_11000103 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000103 N 0.000
fgenesh1_pg.scaffold_257000036 Physcomitrella patens fgenesh1_pg.scaffold_257000036 N 0.000
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.000
fgeneshCV_pg.C_scaffold_14000116 Chlorella vulgaris fgeneshCV_pg.C_scaffold_14000116 I 0.000
fgeneshNG_pg.scaffold_32000024 Naegleria gruberi fgeneshNG_pg.scaffold_32000024 N 0.000
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.000
gw1.3.668.1 Ostreococcus RCC809 gw1.3.668.1 I 0.000
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.000
gwEuk.3.753.1 Ostreococcus lucimarinus gwEuk.3.753.1 I 0.000
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.000