fgeneshNG_pg.scaffold_32000024 (Naegleria gruberi)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgeneshNG_pg.scaffold_32000024 T05367_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgeneshNG_pg.scaffold_32000024 CCCH ZF 186 212
fgeneshNG_pg.scaffold_32000024 CCCH ZF 224 250

Links

Other CCCH ZF family RBPs
Other Naegleria gruberi RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.1.1133.1 Micromonas pusilla gw1.1.1133.1 N 0.722
fgenesh1_pg.C_scaffold_4000193 Sporobolomyces roseus fgenesh1_pg.C_scaffold_4000193 N 0.722
fgenesh1_pg.scaffold_257000036 Physcomitrella patens fgenesh1_pg.scaffold_257000036 N 0.722
fgenesh2_pg.C_scaffold_32000041 Selaginella moellendorfii fgenesh2_pg.C_scaffold_32000041 N 0.704
estExt_fgenesh1_pg.C_3580026 Physcomitrella patens estExt_fgenesh1_pg.C_3580026 N 0.704
e_gw1.45.79.1 Selaginella moellendorfii e_gw1.45.79.1 N 0.704
gw1.8.374.1 Chlorella NC64A gw1.8.374.1 N 0.704
EFA80829.1 Polysphondylium pallidum EFA80829.1 I 0.704
SPPG_04528 Spizellomyces punctatus SPPG_04528 N 0.704