KHDRBS1 (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000010001 T19644_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.847
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.847
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.790
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000025163 KH 67 143
ENSTRUP00000025164 KH 61 137

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG24692 Caenorhabditis briggsae CBG24692 N 0.000
CJA05236 Caenorhabditis japonica CJA05236 N 0.000
CJA09176 Caenorhabditis japonica CJA09176 N 0.000
CJA10241 Caenorhabditis japonica CJA10241 N 0.000
CJA17831 Caenorhabditis japonica CJA17831 N 0.000
CJA28475 Caenorhabditis japonica CJA28475 N 0.000
dct-10 Caenorhabditis elegans Y38H6C.5 N 0.000