KHDRBS1 (Sorex araneus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSSARG00000008479 T19474_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.965
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.965
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.762
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.738
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000007665 KH 157 240

Links

Other KH family RBPs
Other Sorex araneus RBPs

105 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHDRBS1 Canis familiaris ENSCAFG00000010777 I 0.965
ENSCHOG00000006973 Choloepus hoffmanni ENSCHOG00000006973 I 0.965
LOC100414412 Callithrix jacchus ENSCJAG00000006580 I 0.965
KHDRBS1 Cavia porcellus ENSCPOG00000024148 I 0.965
Q29RQ2_BOVIN Bos taurus ENSBTAG00000012497 I 0.965
XM_001365874.1 Monodelphis domestica ENSMODG00000017551 I 0.965
KHDRBS1 Vicugna pacos ENSVPAG00000006966 I 0.965
KHDRBS1 Pan troglodytes ENSPTRG00000000469 I 0.965
Ame_R010128 Ailuropoda melanoleuca Ame_R010128 I 0.965
KHDRBS1 Ochotona princeps ENSOPRG00000005131 I 0.965
KHDRBS1 Equus caballus ENSECAG00000019346 I 0.965
KHDR1_CHICK Gallus gallus ENSGALG00000003272 I 0.965
KHDRBS1 Procavia capensis ENSPCAG00000009844 I 0.965
KHDRBS1 Gorilla gorilla ENSGGOG00000008633 I 0.965
ENSPPYG00000001605 Pongo pygmaeus ENSPPYG00000001605 I 0.965
KHDRBS1 Loxodonta africana ENSLAFG00000009414 I 0.965
KHDRBS1 Meleagris gallopavo ENSMGAG00000004455 I 0.965
KHDRBS1 Felis catus ENSFCAG00000006511 I 0.965
KHDRBS1 Homo sapiens ENSG00000121774 D 0.965
Khdrbs1 Mus musculus ENSMUSG00000028790 D 0.965
KHDRBS1 Macaca mulatta ENSMMUG00000023438 I 0.965
KHDRBS1 Tarsius syrichta ENSTSYG00000004921 I 0.965
KHDRBS1 Oryctolagus cuniculus ENSOCUG00000007654 I 0.965
KHDRBS1 Tursiops truncatus ENSTTRG00000009637 I 0.965
KHDRBS1 Tupaia belangeri ENSTBEG00000016857 I 0.965
KHDRBS1 Pteropus vampyrus ENSPVAG00000013289 I 0.965
KHDRBS1 Spermophilus tridecemlineatus ENSSTOG00000014138 I 0.965
KHDRBS1 Ornithorhynchus anatinus ENSOANG00000012357 I 0.965
KHDRBS1 Taeniopygia guttata ENSTGUG00000017346 I 0.964
KHDRBS1 Anolis carolinensis ENSACAG00000011693 I 0.953
khdrbs1 Xenopus tropicalis ENSXETG00000005246 I 0.918
KHDRBS1 Oryzias latipes ENSORLG00000020884 I 0.845
KHDRBS1 Takifugu rubripes ENSTRUG00000010001 I 0.833
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000013071 I 0.833
KHDRBS1 Gasterosteus aculeatus ENSGACG00000009219 I 0.833
khdrbs1a Danio rerio ENSDARG00000052856 I 0.833
KHDRBS1 Microcebus murinus ENSMICG00000001428 I 0.824
KHDRBS1 Dasypus novemcinctus ENSDNOG00000003761 I 0.812
Khdrbs1 Dipodomys ordii ENSDORG00000011530 I 0.812
khdrbs1b Danio rerio ENSDARG00000070475 I 0.810
KHDRBS1 Takifugu rubripes ENSTRUG00000012039 I 0.810
ENSDARG00000078082 Danio rerio ENSDARG00000078082 I 0.810
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000017471 I 0.798
ENSCJAG00000003689 Callithrix jacchus ENSCJAG00000003689 I 0.788
KHDRBS1 Oryzias latipes ENSORLG00000017156 I 0.786
KHDRBS2 Oryzias latipes ENSORLG00000010165 I 0.762
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.762
KHDRBS2 Homo sapiens ENSG00000112232 D 0.762
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.762
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.762
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.762
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.762
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.762
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.762
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.762
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.762
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.762
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.762
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.762
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.762
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.762
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.762
LOC100056966 Equus caballus ENSECAG00000021541 I 0.762
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.762
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.762
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.762
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.750
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.750
khdrbs2 Danio rerio ENSDARG00000069469 I 0.750
KHDRBS2 Takifugu rubripes ENSTRUG00000015760 I 0.750
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.750
Khdrbs2 Dipodomys ordii ENSDORG00000005701 I 0.750
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.750
KHDRBS3 Tursiops truncatus ENSTTRG00000001270 I 0.738
KHDRBS3 Sus scrofa ENSSSCG00000005941 I 0.738
Ame_R010681 Ailuropoda melanoleuca Ame_R010681 I 0.738
KHDRBS3 Ornithorhynchus anatinus ENSOANG00000014074 I 0.738
KHDRBS3 Otolemur garnettii ENSOGAG00000005150 I 0.738
Khdrbs3 Mus musculus ENSMUSG00000022332 I 0.738
Q6J4Q9_PANTR Pan troglodytes ENSPTRG00000020608 I 0.738
KHDRBS3 Tupaia belangeri ENSTBEG00000004773 I 0.738
A4FV24_BOVIN Bos taurus ENSBTAG00000002181 I 0.738
KHDRBS3 Cavia porcellus ENSCPOG00000000342 I 0.738
KHDRBS3 Echinops telfairi ENSETEG00000004701 I 0.738
KHDRBS3 Homo sapiens ENSG00000131773 D 0.738
Q6J4Q8_9PRIM Gorilla gorilla ENSGGOG00000000940 I 0.738
LOC100399263 Callithrix jacchus ENSCJAG00000004331 I 0.738
Q6J4Q6_MACMU Macaca mulatta ENSMMUG00000022248 I 0.738
KHDRBS3 Loxodonta africana ENSLAFG00000004849 I 0.738
KHDRBS3 Monodelphis domestica ENSMODG00000000975 I 0.738
KHDRBS3 Canis familiaris ENSCAFG00000001166 I 0.738
KHDRBS3 Anolis carolinensis ENSACAG00000012042 I 0.738
LOC100058116 Equus caballus ENSECAG00000010194 I 0.726
KHDRBS3 Ochotona princeps ENSOPRG00000000404 I 0.726
KHDRBS3 Taeniopygia guttata ENSTGUG00000012611 I 0.726
KHDRBS3 Spermophilus tridecemlineatus ENSSTOG00000008710 I 0.726
KHDRBS3 Gallus gallus ENSGALG00000016203 I 0.726
KHDRBS2 Gasterosteus aculeatus ENSGACG00000006097 I 0.726
KHDRBS3 Meleagris gallopavo ENSMGAG00000012888 I 0.726
KHDRBS3 Oryctolagus cuniculus ENSOCUG00000000743 I 0.726
KHDRBS3 Pteropus vampyrus ENSPVAG00000017021 I 0.718
khdrbs3 Xenopus tropicalis ENSXETG00000009227 I 0.714
KHDRBS3 Oryzias latipes ENSORLG00000013441 I 0.702
KHDRBS3 Tetraodon nigroviridis ENSTNIG00000014021 I 0.702
KHDRBS3 Takifugu rubripes ENSTRUG00000013451 I 0.702