khdrbs1 (Xenopus tropicalis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSXETG00000005246 T19752_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS1
M160_0.6 		Homo sapiens AUAAAAV RNAcompete
Ray et al.(2013)
RNCMPT00169 		0.953
Khdrbs1
M060_0.6 		Mus musculus UAAAAVV RNAcompete
Ray et al.(2013)
RNCMPT00062 		0.953
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.741
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000011457 KH 62 146

Links

Other KH family RBPs
Other Xenopus tropicalis RBPs

101 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Khdrbs1 Mus musculus ENSMUSG00000028790 D 0.953
XM_001365874.1 Monodelphis domestica ENSMODG00000017551 I 0.953
KHDRBS1 Ornithorhynchus anatinus ENSOANG00000012357 I 0.953
KHDRBS1 Oryctolagus cuniculus ENSOCUG00000007654 I 0.953
KHDRBS1 Cavia porcellus ENSCPOG00000024148 I 0.953
KHDRBS1 Ochotona princeps ENSOPRG00000005131 I 0.953
KHDRBS1 Macaca mulatta ENSMMUG00000023438 I 0.953
Ame_R010128 Ailuropoda melanoleuca Ame_R010128 I 0.953
KHDR1_CHICK Gallus gallus ENSGALG00000003272 I 0.953
KHDRBS1 Homo sapiens ENSG00000121774 D 0.953
KHDRBS1 Equus caballus ENSECAG00000019346 I 0.953
KHDRBS1 Gorilla gorilla ENSGGOG00000008633 I 0.953
KHDRBS1 Meleagris gallopavo ENSMGAG00000004455 I 0.953
KHDRBS1 Loxodonta africana ENSLAFG00000009414 I 0.953
KHDRBS1 Procavia capensis ENSPCAG00000009844 I 0.953
LOC100414412 Callithrix jacchus ENSCJAG00000006580 I 0.953
Q29RQ2_BOVIN Bos taurus ENSBTAG00000012497 I 0.953
KHDRBS1 Tupaia belangeri ENSTBEG00000016857 I 0.953
KHDRBS1 Tarsius syrichta ENSTSYG00000004921 I 0.953
KHDRBS1 Tursiops truncatus ENSTTRG00000009637 I 0.953
KHDRBS1 Vicugna pacos ENSVPAG00000006966 I 0.953
KHDRBS1 Felis catus ENSFCAG00000006511 I 0.953
KHDRBS1 Spermophilus tridecemlineatus ENSSTOG00000014138 I 0.953
KHDRBS1 Pteropus vampyrus ENSPVAG00000013289 I 0.953
ENSPPYG00000001605 Pongo pygmaeus ENSPPYG00000001605 I 0.953
ENSCHOG00000006973 Choloepus hoffmanni ENSCHOG00000006973 I 0.953
KHDRBS1 Pan troglodytes ENSPTRG00000000469 I 0.953
KHDRBS1 Canis familiaris ENSCAFG00000010777 I 0.953
KHDRBS1 Anolis carolinensis ENSACAG00000011693 I 0.941
KHDRBS1 Taeniopygia guttata ENSTGUG00000017346 I 0.929
KHDRBS1 Sorex araneus ENSSARG00000008479 I 0.918
KHDRBS1 Microcebus murinus ENSMICG00000001428 I 0.835
Khdrbs1 Dipodomys ordii ENSDORG00000011530 I 0.824
KHDRBS1 Oryzias latipes ENSORLG00000020884 I 0.824
KHDRBS1 Dasypus novemcinctus ENSDNOG00000003761 I 0.824
khdrbs1a Danio rerio ENSDARG00000052856 I 0.812
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000013071 I 0.812
khdrbs1b Danio rerio ENSDARG00000070475 I 0.812
ENSDARG00000078082 Danio rerio ENSDARG00000078082 I 0.812
KHDRBS1 Takifugu rubripes ENSTRUG00000010001 I 0.812
KHDRBS1 Gasterosteus aculeatus ENSGACG00000009219 I 0.812
ENSCJAG00000003689 Callithrix jacchus ENSCJAG00000003689 I 0.800
KHDRBS1 Takifugu rubripes ENSTRUG00000012039 I 0.788
KHDRBS1 Tetraodon nigroviridis ENSTNIG00000017471 I 0.776
KHDRBS1 Oryzias latipes ENSORLG00000017156 I 0.765
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.741
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.741
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.741
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.741
KHDRBS2 Homo sapiens ENSG00000112232 D 0.741
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.741
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.741
KHDRBS2 Oryzias latipes ENSORLG00000010165 I 0.741
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.741
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.741
LOC100056966 Equus caballus ENSECAG00000021541 I 0.741
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.741
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.741
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.741
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.741
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.741
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.741
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.741
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.741
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.741
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.741
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.729
Q6J4Q6_MACMU Macaca mulatta ENSMMUG00000022248 I 0.729
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.729
Khdrbs2 Dipodomys ordii ENSDORG00000005701 I 0.729
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.729
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.729
khdrbs2 Danio rerio ENSDARG00000069469 I 0.729
KHDRBS2 Takifugu rubripes ENSTRUG00000015760 I 0.729
KHDRBS3 Anolis carolinensis ENSACAG00000012042 I 0.718
KHDRBS3 Sus scrofa ENSSSCG00000005941 I 0.718
KHDRBS3 Canis familiaris ENSCAFG00000001166 I 0.718
A4FV24_BOVIN Bos taurus ENSBTAG00000002181 I 0.718
KHDRBS3 Tupaia belangeri ENSTBEG00000004773 I 0.718
KHDRBS3 Tursiops truncatus ENSTTRG00000001270 I 0.718
KHDRBS3 Loxodonta africana ENSLAFG00000004849 I 0.718
KHDRBS3 Monodelphis domestica ENSMODG00000000975 I 0.718
Q6J4Q8_9PRIM Gorilla gorilla ENSGGOG00000000940 I 0.718
Ame_R010681 Ailuropoda melanoleuca Ame_R010681 I 0.718
KHDRBS3 Homo sapiens ENSG00000131773 D 0.718
Khdrbs3 Mus musculus ENSMUSG00000022332 I 0.718
KHDRBS3 Ornithorhynchus anatinus ENSOANG00000014074 I 0.718
LOC100399263 Callithrix jacchus ENSCJAG00000004331 I 0.718
Q6J4Q9_PANTR Pan troglodytes ENSPTRG00000020608 I 0.718
KHDRBS3 Cavia porcellus ENSCPOG00000000342 I 0.718
KHDRBS3 Echinops telfairi ENSETEG00000004701 I 0.718
KHDRBS3 Otolemur garnettii ENSOGAG00000005150 I 0.718
KHDRBS3 Pteropus vampyrus ENSPVAG00000017021 I 0.718
KHDRBS3 Ochotona princeps ENSOPRG00000000404 I 0.706
KHDRBS3 Gallus gallus ENSGALG00000016203 I 0.706
KHDRBS2 Gasterosteus aculeatus ENSGACG00000006097 I 0.706
LOC100058116 Equus caballus ENSECAG00000010194 I 0.706
KHDRBS3 Meleagris gallopavo ENSMGAG00000012888 I 0.706
KHDRBS3 Spermophilus tridecemlineatus ENSSTOG00000008710 I 0.706
KHDRBS3 Oryctolagus cuniculus ENSOCUG00000000743 I 0.706
KHDRBS3 Taeniopygia guttata ENSTGUG00000012611 I 0.706