RBM5 (Choloepus hoffmanni)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSCHOG00000009429 T25523_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.913
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.913
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000008352 RRM 112 171
ENSCHOP00000008352 RanBP ZF 181 210
ENSCHOP00000008352 RRM 233 302

Links

Other RanBP ZF,RRM family RBPs
Other Choloepus hoffmanni RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A0JMV4 Xenopus laevis A0JMV4 I 0.767
AAH77408 Xenopus laevis AAH77408 I 0.763
AAI26020 Xenopus laevis AAI26020 I 0.767
Ame_R008692 Ailuropoda melanoleuca Ame_R008692 I 0.913
RBM5 Anolis carolinensis ENSACAG00000008580 I 0.818
RBM5_BOVIN Bos taurus ENSBTAG00000006330 I 0.913
RBM5 Canis familiaris ENSCAFG00000010866 I 0.946
A6MKZ6_CALJA Callithrix jacchus ENSCJAG00000004740 I 0.913
RBM5 Cavia porcellus ENSCPOG00000008151 I 0.913
RBM5 Dasypus novemcinctus ENSDNOG00000011756 N 0.718
Rbm5 Dipodomys ordii ENSDORG00000007692 I 0.913
LOC100052535 Equus caballus ENSECAG00000020447 I 0.913
RBM5 Erinaceus europaeus ENSEEUG00000005943 I 0.919
RBM5 Echinops telfairi ENSETEG00000012773 I 0.872
RBM5 Felis catus ENSFCAG00000014639 N 0.817
RBM5 Homo sapiens ENSG00000003756 D 0.913
RBM5 Gallus gallus ENSGALG00000004626 I 0.851
RBM5 Gorilla gorilla ENSGGOG00000014490 I 0.814
RBM5 Loxodonta africana ENSLAFG00000006733 I 0.913
RBM5 Macropus eugenii ENSMEUG00000012994 N 0.817
RBM5 Meleagris gallopavo ENSMGAG00000003972 I 0.856
RBM5 Microcebus murinus ENSMICG00000016179 N 0.894
RBM5 Myotis lucifugus ENSMLUG00000007875 I 0.907
RBM5 Macaca mulatta ENSMMUG00000004921 I 0.913
RBM5 Monodelphis domestica ENSMODG00000012301 I 0.901
Rbm5 Mus musculus ENSMUSG00000032580 I 0.913
RBM5 Ornithorhynchus anatinus ENSOANG00000006557 I 0.907
RBM5 Oryctolagus cuniculus ENSOCUG00000011652 I 0.890
RBM5 Otolemur garnettii ENSOGAG00000004205 N 0.700
RBM5 Ochotona princeps ENSOPRG00000015154 I 0.820
RBM5 Procavia capensis ENSPCAG00000005459 I 0.715
RBM5 Pan troglodytes ENSPTRG00000014946 I 0.913
RBM5 Pteropus vampyrus ENSPVAG00000006812 I 0.907
Rbm5 Rattus norvegicus ENSRNOG00000018153 I 0.913
RBM5 Sorex araneus ENSSARG00000009724 I 0.709
RBM5 Sus scrofa ENSSSCG00000011395 I 0.913
RBM5 Spermophilus tridecemlineatus ENSSTOG00000013856 I 0.913
RBM5 Tupaia belangeri ENSTBEG00000005424 I 0.832
RBM5 Taeniopygia guttata ENSTGUG00000006417 I 0.856
RBM5 Tetraodon nigroviridis ENSTNIG00000014742 I 0.700
RBM5 Tursiops truncatus ENSTTRG00000007717 I 0.901
RBM5 Vicugna pacos ENSVPAG00000009388 I 0.878
rbm5 Xenopus tropicalis ENSXETG00000007303 I 0.746
Q6DDU9 Xenopus laevis Q6DDU9 I 0.763