CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_07630
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_07630
T31372_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_07630
RRM
4
74
LFIGGLAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMNAMSNQEFDGRMIR
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB02963.1
Alternaria brassicicola
AB02963.1
N
0.704
ARB_03747
Arthroderma benhamiae
ARB_03747
N
0.740
BDBG_01954
Blastomyces dermatitidis
BDBG_01954
N
0.873
ACLA_036560
Aspergillus clavatus
CADACLAG00003885
N
0.775
AFLA_086540
Aspergillus flavus
CADAFLAG00001433
N
0.803
AFUA_3G08580
Aspergillus fumigatus
CADAFUAG00005852
N
0.817
An02g12270
Aspergillus niger
CADANGAG00002750
N
0.901
ANIA_02989
Aspergillus nidulans
CADANIAG00010091
N
0.887
AO090005001419
Aspergillus oryzae
CADAORAG00003299
N
0.803
ATEG_01614
Aspergillus terreus
CADATEAG00002872
N
0.704
NFIA_068550
Neosartorya fischeri
CADNFIAG00006348
N
0.817
CIMG_07653
Coccidioides immitis
CIMG_07653
N
0.887
CPSG_09452
Coccidioides posadasii
CPSG_09452
N
0.887
estExt_fgenesh1_kg.C_chr_50164
Mycosphaerella graminicola
estExt_fgenesh1_kg.C_chr_50164
N
0.746
estExt_Genewise1Plus.C_12858
Trichoderma atroviride
estExt_Genewise1Plus.C_12858
N
0.704
estExt_Genewise1Plus.C_31070
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_31070
N
0.746
estExt_Genewise1Plus.C_70764
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_70764
N
0.704
e_gw1.00866.790.1
Aspergillus carbonarius
e_gw1.00866.790.1
N
0.761
MCYG_06115
Microsporum canis
MCYG_06115
N
0.873
MGYG_01973
Microsporum gypseum
MGYG_01973
N
0.901
PABG_01590
Paracoccidioides brasiliensis
PABG_01590
N
0.873
Pc20g03510
Penicillium chrysogenum
Pc20g03510
N
0.718
PMAA_013050
Penicillium marneffei
PMAA_013050
N
0.803
PTRG_07976
Pyrenophora tritici repentis
PTRG_07976
N
0.718
SNOG_04431
Stagonospora nodorum
SNOG_04431
N
0.746
TERG_04706
Trichophyton rubrum
TERG_04706
N
0.887
TESG_06069
Trichophyton tonsurans
TESG_06069
N
0.887