AT1G09230 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT1G09230-TAIR-G T32631_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT1G09230.1-P RRM 30 96
AT1G09230.1-P RRM 354 428

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29950.m001170 Ricinus communis 29950.m001170 N 0.761
BRADI2G18227 Brachypodium distachyon BRADI2G18227 N 0.746
cassava35697.valid.m1 Manihot esculenta cassava35697.valid.m1 N 0.739
XM_002892448.1 Arabidopsis lyrata fgenesh2_kg.1__966__AT1G09230.1 N 0.979
Glyma16g04710.1 Glycine max Glyma16g04710.1 N 0.746
GRMZM2G042615 Zea mays GRMZM2G042615 N 0.725
GSVIVG00020933001 Vitis vinifera GSVIVG00020933001 N 0.782
LOC_Os03g21020 Oryza sativa LOC_Os03g21020 N 0.746
B9I5U9_POPTR Populus trichocarpa POPTR_0013s05120 N 0.732
ppa005530m Prunus persica ppa005530m N 0.748
SB01G036600 Sorghum bicolor Sb01g036600 N 0.718