LOC_Os03g21020 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os03g21020 T44991_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g21020.1 RRM 45 111
LOC_Os03g21020.1 RRM 380 454

Links

Other RRM family RBPs
Other Oryza sativa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI2G18227 Brachypodium distachyon BRADI2G18227 N 0.880
SB01G036600 Sorghum bicolor Sb01g036600 N 0.880
GRMZM2G042615 Zea mays GRMZM2G042615 N 0.873
GSVIVG00020933001 Vitis vinifera GSVIVG00020933001 N 0.768
BGIOSIBCE010958 Oryza indica BGIOSIBCE010958 N 0.768
29950.m001170 Ricinus communis 29950.m001170 N 0.768
AT1G09230 Arabidopsis thaliana AT1G09230-TAIR-G N 0.746
ppa005530m Prunus persica ppa005530m N 0.741
XM_002892448.1 Arabidopsis lyrata fgenesh2_kg.1__966__AT1G09230.1 N 0.739
cassava35697.valid.m1 Manihot esculenta cassava35697.valid.m1 N 0.732
B9I5U9_POPTR Populus trichocarpa POPTR_0013s05120 N 0.718