XM_002892448.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh2_kg.1__966__AT1G09230.1 T44500_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__966__AT1G09230.1 RRM 30 96
fgenesh2_kg.1__966__AT1G09230.1 RRM 350 424

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT1G09230 Arabidopsis thaliana AT1G09230-TAIR-G N 0.979
GSVIVG00020933001 Vitis vinifera GSVIVG00020933001 N 0.782
29950.m001170 Ricinus communis 29950.m001170 N 0.768
cassava35697.valid.m1 Manihot esculenta cassava35697.valid.m1 N 0.761
Glyma16g04710.1 Glycine max Glyma16g04710.1 N 0.754
ppa005530m Prunus persica ppa005530m N 0.748
BRADI2G18227 Brachypodium distachyon BRADI2G18227 N 0.746
LOC_Os03g21020 Oryza sativa LOC_Os03g21020 N 0.739
B9I5U9_POPTR Populus trichocarpa POPTR_0013s05120 N 0.739
GRMZM2G042615 Zea mays GRMZM2G042615 N 0.725
SB01G036600 Sorghum bicolor Sb01g036600 N 0.718