Celf6 (Dipodomys ordii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDORG00000004882 T36443_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.863
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.782
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000004570 RRM 38 107
ENSDORP00000004570 RRM 126 178
ENSDORP00000004570 RRM 371 441

Links

Other RRM family RBPs
Other Dipodomys ordii RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Al_scaffold_0769_1 Arabidopsis lyrata Al_scaffold_0769_1 N 0.000
Cucsa.069370 Cucumis sativus Cucsa.069370 N 0.000
Glyma17g03290.1 Glycine max Glyma17g03290.1 N 0.000
B9N014_POPTR Populus trichocarpa POPTR_0008s23200 N 0.000
ppa002599m Prunus persica ppa002599m N 0.000