CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM15
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000007932
T37457_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000010504
RRM
126
194
KISDLGTQLSDEDIEDGLFHEFKKFGDVSVKISRSNDERIAFVNFRKPEDARAAKHARGRLVLYDRPLK
ENSGACP00000010504
RRM
301
370
LFLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQTSTYGFLKFENLDMAHRAKLSMSGKIVGHNPIK
ENSGACP00000010504
RRM
382
445
LWVGGLGPWVPVAALAREFDRFGTIRTIDYRKGDTWAYIQYESLDAAQAACTHMRGFPLGGPER
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH70824
Xenopus laevis
AAH70824
N
0.754
Ame_R016998
Ailuropoda melanoleuca
Ame_R016998
N
0.841
ENSACAG00000012741
Anolis carolinensis
ENSACAG00000012741
N
0.828
RBM15
Bos taurus
ENSBTAG00000012555
N
0.841
RBM15
Canis familiaris
ENSCAFG00000019789
N
0.841
RBM15
Callithrix jacchus
ENSCJAG00000003411
N
0.841
rbm15
Danio rerio
ENSDARG00000073847
N
0.901
RBM15
Dasypus novemcinctus
ENSDNOG00000016207
N
0.841
Rbm15
Dipodomys ordii
ENSDORG00000005669
N
0.841
LOC100058541
Equus caballus
ENSECAG00000023660
N
0.841
RBM15
Echinops telfairi
ENSETEG00000002452
N
0.702
RBM15
Felis catus
ENSFCAG00000007674
N
0.837
RBM15
Homo sapiens
ENSG00000162775
N
0.841
RBM15
Gasterosteus aculeatus
ENSGACG00000001022
N
0.842
RBM15B
Gasterosteus aculeatus
ENSGACG00000001575
N
0.709
RBM15
Gallus gallus
ENSGALG00000000401
N
0.842
RBM15
Gorilla gorilla
ENSGGOG00000003655
N
0.841
RBM15
Loxodonta africana
ENSLAFG00000012897
N
0.841
RBM15
Macropus eugenii
ENSMEUG00000015940
N
0.845
ENSMGAG00000013763
Meleagris gallopavo
ENSMGAG00000013763
N
0.842
RBM15
Macaca mulatta
ENSMMUG00000015020
N
0.841
RBM15
Monodelphis domestica
ENSMODG00000001706
N
0.850
Rbm15
Mus musculus
ENSMUSG00000048109
N
0.841
RBM15
Oryctolagus cuniculus
ENSOCUG00000002434
N
0.841
RBM15
Otolemur garnettii
ENSOGAG00000009182
N
0.822
RBM15
Oryzias latipes
ENSORLG00000000433
N
0.833
RBM15
Oryzias latipes
ENSORLG00000006197
N
0.951
RBM15
Procavia capensis
ENSPCAG00000006329
N
0.827
ENSPPYG00000001051
Pongo pygmaeus
ENSPPYG00000001051
N
0.841
RBM15
Pan troglodytes
ENSPTRG00000001074
N
0.841
RBM15
Pteropus vampyrus
ENSPVAG00000007193
N
0.837
RBM15
Sus scrofa
ENSSSCG00000006809
N
0.841
RBM15
Tupaia belangeri
ENSTBEG00000008339
N
0.841
RBM15
Tetraodon nigroviridis
ENSTNIG00000015129
N
0.936
RBM15
Takifugu rubripes
ENSTRUG00000002921
N
0.956
RBM15
Takifugu rubripes
ENSTRUG00000007851
N
0.823
RBM15
Tarsius syrichta
ENSTSYG00000000106
N
0.837
RBM15
Tursiops truncatus
ENSTTRG00000001317
N
0.841
rbm15
Xenopus tropicalis
ENSXETG00000002029
N
0.754