ENSPPYG00000002703 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000002703 T40452_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.824
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.824
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000003156 RRM 11 96
ENSPPYP00000003156 RRM 115 185
ENSPPYP00000003156 RRM 223 287

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG24692 Caenorhabditis briggsae CBG24692 N 0.000
CJA05236 Caenorhabditis japonica CJA05236 N 0.000
CJA09176 Caenorhabditis japonica CJA09176 N 0.000
CJA10241 Caenorhabditis japonica CJA10241 N 0.000
CJA17831 Caenorhabditis japonica CJA17831 N 0.000
CJA28475 Caenorhabditis japonica CJA28475 N 0.000
dct-10 Caenorhabditis elegans Y38H6C.5 N 0.000