ENSPPYG00000002703 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000002703 T40452_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.824
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.824
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000003156 RRM 11 96
ENSPPYP00000003156 RRM 115 185
ENSPPYP00000003156 RRM 223 287

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIAL1 Macaca mulatta ENSMMUG00000001472 I 1.000
TIAL1 Monodelphis domestica ENSMODG00000008865 I 1.000
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 1.000
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 1.000
TIAL1 Homo sapiens ENSG00000151923 D 1.000
TIAL1 Canis familiaris ENSCAFG00000012171 I 1.000
Tial1 Mus musculus ENSMUSG00000030846 I 1.000
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 1.000
TIAL1 Pan troglodytes ENSPTRG00000002996 I 1.000
Tial1 Rattus norvegicus ENSRNOG00000020271 I 1.000
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.995
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.995
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.946
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.923
TIAL1 Equus caballus ENSECAG00000009970 I 0.923
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.923
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.919
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.905
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.874
tial1 Danio rerio ENSDARG00000009525 I 0.869
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.834
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.833
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.829
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.829
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.829
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.829
Tia1 Mus musculus ENSMUSG00000071337 I 0.829
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.829
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.824
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.824
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.824
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.824
TIA1 Homo sapiens ENSG00000116001 D 0.824
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.824
TIA1 Echinops telfairi ENSETEG00000010021 I 0.824
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.824
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.824
TIA1 Canis familiaris ENSCAFG00000003341 I 0.824
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.824
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.824
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.824
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.824
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.824
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.820
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.820
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.811
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.811
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.806
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.806
AAH80105 Xenopus laevis AAH80105 I 0.802
AAH77169 Xenopus laevis AAH77169 I 0.797
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.797
TIA1 Oryzias latipes ENSORLG00000015642 I 0.797
CAC95018 Xenopus laevis CAC95018 I 0.797
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.793
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.793
tia1l Danio rerio ENSDARG00000026476 I 0.793
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.788
TIA1 Oryzias latipes ENSORLG00000002529 I 0.788
tia1 Danio rerio ENSDARG00000052536 I 0.784
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.779
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.779
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.779
TIAL1 Macropus eugenii ENSMEUG00000013120 N 0.775
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.766
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.757
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.743
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.739
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.716
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.712