SLTM (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000017767 T42379_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000045539 RRM 340 410
ENSTRUP00000045540 RRM 338 408
ENSTRUP00000045541 RRM 205 275
ENSTRUP00000045542 RRM 29 99

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI00172 Xenopus laevis AAI00172 N 0.873
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.831
SLTM Anolis carolinensis ENSACAG00000015120 N 0.817
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.704
SAFB2 Bos taurus ENSBTAG00000001790 N 0.704
SLTM Bos taurus ENSBTAG00000011319 N 0.831
SLTM Canis familiaris ENSCAFG00000016586 N 0.831
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.704
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.803
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.704
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.817
SLTM Cavia porcellus ENSCPOG00000026109 N 0.831
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.873
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.831
Sltm Dipodomys ordii ENSDORG00000007463 N 0.831
LOC100068259 Equus caballus ENSECAG00000011267 N 0.831
LOC100064922 Equus caballus ENSECAG00000018978 N 0.704
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.761
SLTM Echinops telfairi ENSETEG00000008003 N 0.831
SLTM Felis catus ENSFCAG00000004826 N 0.817
SAFB2 Felis catus ENSFCAG00000011834 N 0.704
SAFB2 Homo sapiens ENSG00000130254 N 0.704
SLTM Homo sapiens ENSG00000137776 N 0.831
SLTM Gasterosteus aculeatus ENSGACG00000015814 N 0.915
SLTM Gallus gallus ENSGALG00000004192 N 0.817
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.704
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.704
SLTM Loxodonta africana ENSLAFG00000017922 N 0.817
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.817
SLTM Microcebus murinus ENSMICG00000013069 N 0.817
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.704
SLTM Macaca mulatta ENSMMUG00000022200 N 0.831
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.831
Sltm Mus musculus ENSMUSG00000032212 N 0.817
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.831
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.831
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.704
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.831
SLTM Oryzias latipes ENSORLG00000008161 N 0.901
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.831
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.704
SLTM Pan troglodytes ENSPTRG00000007121 N 0.831
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.704
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.831
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.831
SAFB2 Sorex araneus ENSSARG00000000649 N 0.704
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.817
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.817
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.704
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.704
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.831
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.817
SLTM Tetraodon nigroviridis ENSTNIG00000009334 N 0.972
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.831
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.704
SLTM Vicugna pacos ENSVPAG00000008606 N 0.831
sltm Xenopus tropicalis ENSXETG00000010840 N 0.873
Q498L2 Xenopus laevis Q498L2 N 0.873