CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GH18670
(
Drosophila grimshawi
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0126137
T19875_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0152576
KH
3280
3342
CKKVQVPVNAISRVIGRAGSNINAIRATTGAHIEVEKQGKNQSERSITIKGLTDATKQAHMLI
Links
Other
KH
family RBPs
Other
Drosophila grimshawi
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ10528
Drosophila virilis
FBgn0197808
N
1.000
GK11389
Drosophila willistoni
FBgn0213400
N
0.984
GF16118
Drosophila ananassae
FBgn0093140
N
0.968
mask
Drosophila melanogaster
FBgn0043884
N
0.968
GG11270
Drosophila erecta
FBgn0103571
N
0.968
GE23462
Drosophila yakuba
FBgn0240644
N
0.968
GA27251-RA
Drosophila pseudoobscura
FBgn0248619
N
0.968
CPIJ002709
Culex quinquefasciatus
CPIJ002709
N
0.841
AGAP003519
Anopheles gambiae
AGAP003519
N
0.841
CpipJ_CPIJ002709
Culex pipiens
CpipJ_CPIJ002709
N
0.841
PHUM473040
Pediculus humanus
PHUM473040
N
0.810
amel4_ncbi_hmm44335
Apis mellifera
amel4_ncbi_hmm44335
N
0.794
DGIL_AUG5s5041g4t3
Acyrtosiphon pisum
DGIL_AUG5s5041g4t3
N
0.762
BGIBMGA006328
Bombyx mori
BGIBMGA006328
N
0.746