CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DGIL_AUG5s5041g4t3
(
Acyrtosiphon pisum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
DGIL_AUG5s5041g4t3
T18019_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s5041g4t3
KH
1319
1381
SKKVSVPLNAISRVIGRGGSNINAIRASTGALIEVDNQSKGQGERIITIKGSTDVTKQAHDLI
Links
Other
KH
family RBPs
Other
Acyrtosiphon pisum
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PHUM473040
Pediculus humanus
PHUM473040
N
0.857
amel4_ncbi_hmm44335
Apis mellifera
amel4_ncbi_hmm44335
N
0.841
BGIBMGA006328
Bombyx mori
BGIBMGA006328
N
0.778
GA27251-RA
Drosophila pseudoobscura
FBgn0248619
N
0.778
GF16118
Drosophila ananassae
FBgn0093140
N
0.778
mask
Drosophila melanogaster
FBgn0043884
N
0.778
GE23462
Drosophila yakuba
FBgn0240644
N
0.778
GG11270
Drosophila erecta
FBgn0103571
N
0.778
GK11389
Drosophila willistoni
FBgn0213400
N
0.762
GJ10528
Drosophila virilis
FBgn0197808
N
0.762
GH18670
Drosophila grimshawi
FBgn0126137
N
0.762
CpipJ_CPIJ002709
Culex pipiens
CpipJ_CPIJ002709
N
0.730
AGAP003519
Anopheles gambiae
AGAP003519
N
0.730
CPIJ002709
Culex quinquefasciatus
CPIJ002709
N
0.730
XP_001195797.1
Strongylocentrotus purpuratus
XP_001195797.1
N
0.714