CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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mki67ip
(
Xenopus tropicalis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSXETG00000000839
T42817_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000001863
RRM
10
80
IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLK
Links
Other
RRM
family RBPs
Other
Xenopus tropicalis
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH59346
Xenopus laevis
AAH59346
N
0.000
AAH84628
Xenopus laevis
AAH84628
N
0.000
Ame_R008048
Ailuropoda melanoleuca
Ame_R008048
N
0.000
HTATSF1
Anolis carolinensis
ENSACAG00000009346
N
0.000
Q2KIC3_BOVIN
Bos taurus
ENSBTAG00000008640
N
0.000
LOC100414869
Callithrix jacchus
ENSCJAG00000003676
N
0.000
HTATSF1
Cavia porcellus
ENSCPOG00000010493
N
0.000
htatsf1
Danio rerio
ENSDARG00000056649
N
0.000
HTATSF1
Dasypus novemcinctus
ENSDNOG00000002254
N
0.000
Htatsf1
Dipodomys ordii
ENSDORG00000006140
N
0.000
LOC100054669
Equus caballus
ENSECAG00000009156
N
0.000
HTATSF1
Felis catus
ENSFCAG00000003458
N
0.000
HTATSF1
Homo sapiens
ENSG00000102241
N
0.000
HTATSF1
Gasterosteus aculeatus
ENSGACG00000020459
N
0.000
Q5ZKD3_CHICK
Gallus gallus
ENSGALG00000006410
N
0.000
HTATSF1
Gorilla gorilla
ENSGGOG00000026072
N
0.000
HTATSF1
Loxodonta africana
ENSLAFG00000014307
N
0.000
HTATSF1
Macropus eugenii
ENSMEUG00000004133
N
0.000
HTATSF1
Meleagris gallopavo
ENSMGAG00000003558
N
0.000
HTATSF1
Myotis lucifugus
ENSMLUG00000009234
N
0.000
HTATSF1
Macaca mulatta
ENSMMUG00000006450
N
0.000
XM_001362552.1
Monodelphis domestica
ENSMODG00000014087
N
0.000
Htatsf1
Mus musculus
ENSMUSG00000067873
N
0.000
HTATSF1
Ornithorhynchus anatinus
ENSOANG00000011674
N
0.000
HTATSF1
Oryctolagus cuniculus
ENSOCUG00000012570
N
0.000
HTATSF1
Oryzias latipes
ENSORLG00000002356
N
0.000
ENSPPYG00000020765
Pongo pygmaeus
ENSPPYG00000020765
N
0.000
HTATSF1
Pan troglodytes
ENSPTRG00000022315
N
0.000
HTATSF1
Pteropus vampyrus
ENSPVAG00000010281
N
0.000
Htatsf1
Rattus norvegicus
ENSRNOG00000027761
N
0.000
HTATSF1
Sorex araneus
ENSSARG00000005193
N
0.000
HTATSF1
Taeniopygia guttata
ENSTGUG00000002099
N
0.000
HTATSF1
Tetraodon nigroviridis
ENSTNIG00000016140
N
0.000
HTATSF1
Takifugu rubripes
ENSTRUG00000013383
N
0.000
HTATSF1
Tursiops truncatus
ENSTTRG00000002269
N
0.000
HTATSF1
Vicugna pacos
ENSVPAG00000004569
N
0.000
htatsf1
Xenopus tropicalis
ENSXETG00000019749
N
0.000