msi (Drosophila simulans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0025033 T43029_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
msi
M096_0.6 		Drosophila melanogaster AGUAGGD RNAcompete
Ray et al.(2013)
RNCMPT00100 		0.743
msi
M095_0.6 		Drosophila melanogaster AGUAGKD RNAcompete
Ray et al.(2013)
RNCMPT00099 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0219626 RRM 54 99
FBpp0219626 RRM 118 187

Links

Other RRM family RBPs
Other Drosophila simulans RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
msi Drosophila melanogaster FBgn0011666 D 0.716
GF17697 Drosophila ananassae FBgn0094715 I 0.709
GG11413 Drosophila erecta FBgn0103713 I 0.716
GH18982 Drosophila grimshawi FBgn0126449 I 0.702
GM10251 Drosophila sechellia FBgn0165202 I 0.716
GK12850 Drosophila willistoni FBgn0214859 I 0.702
GE23609 Drosophila yakuba FBgn0240782 I 0.716
GA27393-RA Drosophila pseudoobscura FBgn0248760 I 0.702