GE23609 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0240782 T44351_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
msi
M096_0.6 		Drosophila melanogaster AGUAGGD RNAcompete
Ray et al.(2013)
RNCMPT00100 		1.000
msi
M095_0.6 		Drosophila melanogaster AGUAGKD RNAcompete
Ray et al.(2013)
RNCMPT00099 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0268619 RRM 208 277
FBpp0268619 RRM 296 365

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GM10251 Drosophila sechellia FBgn0165202 I 1.000
GG11413 Drosophila erecta FBgn0103713 I 1.000
msi Drosophila melanogaster FBgn0011666 D 1.000
GF17697 Drosophila ananassae FBgn0094715 I 0.993
GA27393-RA Drosophila pseudoobscura FBgn0248760 I 0.986
GH18982 Drosophila grimshawi FBgn0126449 I 0.986
GK12850 Drosophila willistoni FBgn0214859 I 0.979
GI22407 Drosophila mojavensis FBgn0145135 I 0.971
AGAP001993 Anopheles gambiae AGAP001993 I 0.943
CpipJ_CPIJ006948 Culex pipiens CpipJ_CPIJ006948 I 0.921
CPIJ006948 Culex quinquefasciatus CPIJ006948 I 0.921
nasonia_NCBI_hmm958624 Nasonia vitripennis nasonia_NCBI_hmm958624 I 0.921
AAEL006057 Aedes aegypti AAEL006057 I 0.914
PHUM361200 Pediculus humanus PHUM361200 I 0.837
DGIL_AUG5s2560g3t3 Acyrtosiphon pisum DGIL_AUG5s2560g3t3 I 0.837
amel4_ncbi_hmm946 Apis mellifera amel4_ncbi_hmm946 I 0.836
e_gw1.7.478.1 Daphnia pulex e_gw1.7.478.1 I 0.780
msi Drosophila simulans FBgn0025033 I 0.716