CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NCU02152
(
Neurospora crassa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
NCU02152
T45189_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU02152T0
RRM
100
167
LTISDLHWWTTDDDIRGWVRQANCESELKDITFSEHKVNGKSKGQAYVEFTSQQAASATKHVIDNLSS
Links
Other
RRM
family RBPs
Other
Neurospora crassa
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BC1G_15622
Botrytis cinerea
BC1G_15622
N
0.704
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.704
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.718
ANIA_04799
Aspergillus nidulans
CADANIAG00005622
N
0.736
ATEG_08730
Aspergillus terreus
CADATEAG00006712
N
0.716
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.718
CHGG_06434
Chaetomium globosum
CHGG_06434
N
0.779
CIMG_00383
Coccidioides immitis
CIMG_00383
N
0.725
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.754
estExt_fgenesh1_pg.C_70148
Neurospora tetrasperma
estExt_fgenesh1_pg.C_70148
N
0.985
estExt_fgenesh2_pm.C_11699
Thielavia terrestris
estExt_fgenesh2_pm.C_11699
N
0.765
fgenesh1_pg.1_#_1066
Myceliophthora thermophila
fgenesh1_pg.1_#_1066
N
0.794
fgenesh3_pm.C_scaffold_2000208
Neurospora discreta
fgenesh3_pm.C_scaffold_2000208
N
0.942
GLRG_04675
Colletotrichum graminicola
GLRG_04675
N
0.714
GSTUMT00002679001
Tuber melanosporum
GSTUMT00002679001
N
0.710
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.704
PABG_00859
Paracoccidioides brasiliensis
PABG_00859
N
0.700
Pa_1_17560
Podospora anserina
Pa_1_17560
N
0.765