cassava19116.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava19116.valid.m1 T49166_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava19116.valid.m1 RRM 54 124

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL017164 Aedes aegypti AAEL017164 N 0.000
AGAP005062 Anopheles gambiae AGAP005062 N 0.000
amel4_ncbi_hmm23479 Apis mellifera amel4_ncbi_hmm23479 N 0.000
BGIBMGA009409 Bombyx mori BGIBMGA009409 N 0.000
CPIJ004892 Culex quinquefasciatus CPIJ004892 N 0.000
CpipJ_CPIJ004892 Culex pipiens CpipJ_CPIJ004892 N 0.000
DGIL_AUG5s15867g5t1 Acyrtosiphon pisum DGIL_AUG5s15867g5t1 N 0.000
CG7185 Drosophila melanogaster FBgn0035872 N 0.000
GA20165-RA Drosophila pseudoobscura FBgn0080160 N 0.000
GG15090 Drosophila erecta FBgn0107344 N 0.000
GH15377 Drosophila grimshawi FBgn0122849 N 0.000
GI12981 Drosophila mojavensis FBgn0135738 N 0.000
GM24949 Drosophila sechellia FBgn0179810 N 0.000
GD13000 Drosophila simulans FBgn0184723 N 0.000
GJ13124 Drosophila virilis FBgn0200351 N 0.000
GK16997 Drosophila willistoni FBgn0218996 N 0.000
GE21315 Drosophila yakuba FBgn0238580 N 0.000
nasonia_NCBI_hmm540594 Nasonia vitripennis nasonia_NCBI_hmm540594 N 0.000
PHUM544500 Pediculus humanus PHUM544500 N 0.000