CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CpipJ_CPIJ004892
(
Culex pipiens
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CpipJ_CPIJ004892
T28908_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ004892-RA
RRM
83
154
LYIGNLSWWTTDQDIADVIGDVGVNDFQEVKFFENRANGQSKGFCVVSLGSENSMRYVMERLPKKELHGQNP
Links
Other
RRM
family RBPs
Other
Culex pipiens
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ004892
Culex quinquefasciatus
CPIJ004892
N
1.000
AAEL017164
Aedes aegypti
AAEL017164
N
0.944
AGAP005062
Anopheles gambiae
AGAP005062
N
0.889
amel4_ncbi_hmm23479
Apis mellifera
amel4_ncbi_hmm23479
N
0.792
nasonia_NCBI_hmm540594
Nasonia vitripennis
nasonia_NCBI_hmm540594
N
0.778
DGIL_AUG5s15867g5t1
Acyrtosiphon pisum
DGIL_AUG5s15867g5t1
N
0.778
BGIBMGA009409
Bombyx mori
BGIBMGA009409
N
0.764
PHUM544500
Pediculus humanus
PHUM544500
N
0.764
GE21315
Drosophila yakuba
FBgn0238580
N
0.736
GK16997
Drosophila willistoni
FBgn0218996
N
0.736
ISCW006578
Ixodes scapularis
ISCW006578
N
0.736
GF23561
Drosophila ananassae
FBgn0100555
N
0.736
CG7185
Drosophila melanogaster
FBgn0035872
N
0.736
GD13000
Drosophila simulans
FBgn0184723
N
0.736
GG15090
Drosophila erecta
FBgn0107344
N
0.736
GM24949
Drosophila sechellia
FBgn0179810
N
0.722
GA20165-RA
Drosophila pseudoobscura
FBgn0080160
N
0.722