ppa004010m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa004010m T58341_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa004010m RRM 9 79

Links

Other RRM family RBPs
Other Prunus persica RBPs

131 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB50269 Xenopus laevis AAB50269 N 0.803
AAH41291 Xenopus laevis AAH41291 N 0.803
AAH80037 Xenopus laevis AAH80037 N 0.803
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.789
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.803
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.803
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.789
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.803
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.789
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.803
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.789
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.789
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.803
cstf2 Danio rerio ENSDARG00000044009 N 0.789
CSTF2 Equus caballus ENSECAG00000009325 N 0.761
CSTF2 Felis catus ENSFCAG00000007000 N 0.803
CSTF2T Felis catus ENSFCAG00000013011 N 0.789
CSTF2 Homo sapiens ENSG00000101811 N 0.803
CSTF2T Homo sapiens ENSG00000177613 N 0.789
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.789
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.803
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.789
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.803
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.789
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.803
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.789
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.803
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.803
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.803
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.803
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.789
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.789
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.803
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.803
Cstf2 Mus musculus ENSMUSG00000031256 N 0.803
Cstf2t Mus musculus ENSMUSG00000053536 N 0.789
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.803
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.789
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.789
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.789
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.803
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.789
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.803
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.789
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.789
CSTF2T Sorex araneus ENSSARG00000002013 N 0.789
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.789
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.789
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.803
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.789
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.803
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.789
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.789
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.789
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.803
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.803
estExt_Genewise1.C_230050 Postia placenta estExt_Genewise1.C_230050 N 0.000
estExt_Genewise1.C_550102 Capitella teleta estExt_Genewise1.C_550102 N 0.746
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.831
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.831
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.831
ISCW015573 Ixodes scapularis ISCW015573 N 0.803
LOAG_12614 Loa loa LOAG_12614 N 0.000
Ppa-cpf-2 Pristionchus pacificus PPA07031 N 0.000
WUBG_08006 Wuchereria bancrofti WUBG_08006 N 0.000