ISCW015573 (Ixodes scapularis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ISCW015573 T44870_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW015573-PA RRM 18 88

Links

Other RRM family RBPs
Other Ixodes scapularis RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.65.110.1 Branchiostoma floridae e_gw.65.110.1 N 0.930
e_gw.65.105.1 Branchiostoma floridae e_gw.65.105.1 N 0.930
CSTF2 Macaca mulatta ENSMMUG00000013008 N 0.901
ENSACAG00000004388 Anolis carolinensis ENSACAG00000004388 N 0.901
AAH41291 Xenopus laevis AAH41291 N 0.901
ENSMODG00000011785 Monodelphis domestica ENSMODG00000011785 N 0.901
Cstf2 Mus musculus ENSMUSG00000031256 N 0.901
CSTF2 Oryctolagus cuniculus ENSOCUG00000010468 N 0.901
AAH80037 Xenopus laevis AAH80037 N 0.901
CSTF2 Myotis lucifugus ENSMLUG00000004598 N 0.901
CSTF2 Gorilla gorilla ENSGGOG00000022267 N 0.901
AAB50269 Xenopus laevis AAB50269 N 0.901
CSTF2 Loxodonta africana ENSLAFG00000000474 N 0.901
ENSMEUG00000007875 Macropus eugenii ENSMEUG00000007875 N 0.901
ENSMEUG00000011186 Macropus eugenii ENSMEUG00000011186 N 0.901
CSTF2 Homo sapiens ENSG00000101811 N 0.901
CSTF2 Microcebus murinus ENSMICG00000014121 N 0.901
Q5ZLS0_CHICK Gallus gallus ENSGALG00000006760 N 0.901
ENSPPYG00000020541 Pongo pygmaeus ENSPPYG00000020541 N 0.901
CSTF2 Cavia porcellus ENSCPOG00000015255 N 0.901
CSTF2 Canis familiaris ENSCAFG00000017551 N 0.901
CSTF2 Taeniopygia guttata ENSTGUG00000002253 N 0.901
CSTF2 Sus scrofa ENSSSCG00000012486 N 0.901
CSTF2 Callithrix jacchus ENSCJAG00000004422 N 0.901
CSTF2 Felis catus ENSFCAG00000007000 N 0.901
cstf2 Xenopus tropicalis ENSXETG00000009642 N 0.901
CSTF2 Tursiops truncatus ENSTTRG00000013556 N 0.901
CSTF2_BOVIN Bos taurus ENSBTAG00000003547 N 0.901
CSTF2 Pan troglodytes ENSPTRG00000022090 N 0.901
CSTF2T Canis familiaris ENSCAFG00000015567 N 0.887
ENSCPOG00000004195 Cavia porcellus ENSCPOG00000004195 N 0.887
CSTF2 Gasterosteus aculeatus ENSGACG00000017326 N 0.887
CSTF2T Homo sapiens ENSG00000177613 N 0.887
CSTF2T Felis catus ENSFCAG00000013011 N 0.887
cstf2 Danio rerio ENSDARG00000044009 N 0.887
ENSGGOG00000022117 Gorilla gorilla ENSGGOG00000022117 N 0.887
CSTF2T Callithrix jacchus ENSCJAG00000005033 N 0.887
CSTF2T Macaca mulatta ENSMMUG00000010845 N 0.887
ENSSSCG00000010430 Sus scrofa ENSSSCG00000010430 N 0.887
ENSSSCG00000009884 Sus scrofa ENSSSCG00000009884 N 0.887
CSTF2T Sorex araneus ENSSARG00000002013 N 0.887
CSTF2T Spermophilus tridecemlineatus ENSSTOG00000005624 N 0.887
CSTF2 Tetraodon nigroviridis ENSTNIG00000016860 N 0.887
CSTF2T Tursiops truncatus ENSTTRG00000003341 N 0.887
CSTF2 Takifugu rubripes ENSTRUG00000004323 N 0.887
D3ZKA4_RAT Rattus norvegicus ENSRNOG00000022436 N 0.887
CSTF2T Pteropus vampyrus ENSPVAG00000006274 N 0.887
Cstf2t Mus musculus ENSMUSG00000053536 N 0.887
CSTF2T Myotis lucifugus ENSMLUG00000011187 N 0.887
CSTF2T Loxodonta africana ENSLAFG00000002058 N 0.887
CSTF2 Oryzias latipes ENSORLG00000001380 N 0.887
CSTF2T Procavia capensis ENSPCAG00000000046 N 0.887
CSTF2T Pan troglodytes ENSPTRG00000002510 N 0.887
ENSPPYG00000002441 Pongo pygmaeus ENSPPYG00000002441 N 0.887
ENSGGOG00000026139 Gorilla gorilla ENSGGOG00000026139 N 0.887
CSTF2T Choloepus hoffmanni ENSCHOG00000011888 N 0.887
Ame_R018612 Ailuropoda melanoleuca Ame_R018612 N 0.887
e_gw.312.28.1 Nematostella vectensis e_gw.312.28.1 N 0.887
CSTF2 Echinops telfairi ENSETEG00000004931 N 0.873
ENSOANG00000004208 Ornithorhynchus anatinus ENSOANG00000004208 N 0.873
DGIL_AUG5s2502g11t1 Acyrtosiphon pisum DGIL_AUG5s2502g11t1 N 0.873
Ame_R018329 Ailuropoda melanoleuca Ame_R018329 N 0.873
amel4_ncbi_hmm3649 Apis mellifera amel4_ncbi_hmm3649 N 0.859
CSTF2T Oryctolagus cuniculus ENSOCUG00000004647 N 0.859
BGIBMGA006476 Bombyx mori BGIBMGA006476 N 0.859
CSTF2 Vicugna pacos ENSVPAG00000006466 N 0.859
CSTF2 Choloepus hoffmanni ENSCHOG00000012803 N 0.859
CSTF2 Equus caballus ENSECAG00000009325 N 0.859
CSTF2 Tupaia belangeri ENSTBEG00000010029 N 0.859
DGIL_AUG5s12011g4t1 Acyrtosiphon pisum DGIL_AUG5s12011g4t1 N 0.859
nasonia_NCBI_hmm235054 Nasonia vitripennis nasonia_NCBI_hmm235054 N 0.859
CPIJ012662 Culex quinquefasciatus CPIJ012662 N 0.831
CpipJ_CPIJ012662 Culex pipiens CpipJ_CPIJ012662 N 0.831
112541 Helobdella robusta 112541 N 0.831
fgeneshTA2_pg.C_scaffold_5000618 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_5000618 N 0.831
AGAP010918 Anopheles gambiae AGAP010918 N 0.817
SNAPOd2T00016915001 Oikopleura dioica SNAPOd2T00016915001 N 0.817
ENSCING00000017649 Ciona intestinalis ENSCING00000017649 N 0.817
estExt_Genewise1.C_550102 Capitella teleta estExt_Genewise1.C_550102 N 0.817
28644.m000926 Ricinus communis 28644.m000926 N 0.817
ENSCSAVG00000010770 Ciona savignyi ENSCSAVG00000010770 N 0.817
AAEL013869 Aedes aegypti AAEL013869 N 0.817
CSTF64 Arabidopsis thaliana AT1G71800-TAIR-G N 0.803
AGAP004414 Anopheles gambiae AGAP004414 N 0.803
XM_002887343.1 Arabidopsis lyrata Al_scaffold_0002_1857 N 0.803
mgf002767m Mimulus guttatus mgf002767m N 0.803
Glyma10g36350.1 Glycine max Glyma10g36350.1 N 0.803
Cucsa.364140 Cucumis sativus Cucsa.364140 N 0.803
Glyma20g31220.1 Glycine max Glyma20g31220.1 N 0.803
CstF-64 Drosophila melanogaster FBgn0027841 N 0.803
mgf012202m Mimulus guttatus mgf012202m N 0.803
PASA_GEN_0100181 Daphnia pulex PASA_GEN_0100181 N 0.803
MDP0000283046 Malus x domestica MDP0000283046 N 0.803
GD19237 Drosophila simulans FBgn0190742 N 0.803
GM17877 Drosophila sechellia FBgn0172784 N 0.803
GL24357 Drosophila persimilis FBgn0161947 N 0.803
GI23336 Drosophila mojavensis FBgn0146063 N 0.803
GJ10336 Drosophila virilis FBgn0197622 N 0.803
GK14167 Drosophila willistoni FBgn0216173 N 0.803
GSVIVG00013670001 Vitis vinifera GSVIVG00013670001 N 0.803
GE25546 Drosophila yakuba FBgn0242611 N 0.803
PK22244.1 Cannabis sativa PK22244.1 N 0.803
GH18352 Drosophila grimshawi FBgn0125820 N 0.803
GG22991 Drosophila erecta FBgn0115148 N 0.803
GF16912 Drosophila ananassae FBgn0093932 N 0.803
MDP0000142436 Malus x domestica MDP0000142436 N 0.803
LjSGA_018671.1 Lotus japonicus LjSGA_018671.1 N 0.803
GA20525-RA Drosophila pseudoobscura FBgn0080519 N 0.803
ppa004010m Prunus persica ppa004010m N 0.803
XP_002159315.1 Hydra magnipapillata XP_002159315.1 N 0.803
XP_001186020.1 Strongylocentrotus purpuratus XP_001186020.1 N 0.803
XP_001181887.1 Strongylocentrotus purpuratus XP_001181887.1 N 0.803
SB05G004860 Sorghum bicolor Sb05g004860 N 0.789
GRMZM2G174919 Zea mays GRMZM2G174919 N 0.789
LOC_Os11g07490 Oryza sativa LOC_Os11g07490 N 0.789
gw1.20.80.1 Selaginella moellendorfii gw1.20.80.1 N 0.789
BRADI4G24180 Brachypodium distachyon BRADI4G24180 N 0.789
PHUM441150 Pediculus humanus PHUM441150 N 0.775
MDP0000208337 Malus x domestica MDP0000208337 N 0.775
fgenesh1_pg.C_scaffold_74000038 Phytophthora ramorum fgenesh1_pg.C_scaffold_74000038 N 0.761
s_451557 Phytophthora sojae s_451557 N 0.761
SPPG_01899 Spizellomyces punctatus SPPG_01899 N 0.761
BGIOSIBCE033690 Oryza indica BGIOSIBCE033690 N 0.761
SPRG_10503 Saprolegnia parasitica SPRG_10503 N 0.761
WUBG_08006 Wuchereria bancrofti WUBG_08006 N 0.746
PITG_14249 Phytophthora infestans PITG_14249 N 0.746
LOAG_12614 Loa loa LOAG_12614 N 0.746
Bm1_06205 Brugia malayi Bm1_06205 N 0.746
estExt_fgenesh1_pm.C_80118 Phytophthora capsici estExt_fgenesh1_pm.C_80118 N 0.746
EFA81339.1 Polysphondylium pallidum EFA81339.1 N 0.732
gw1.36.17.1 Physcomitrella patens gw1.36.17.1 N 0.732
estExt_Genewise1.C_230050 Postia placenta estExt_Genewise1.C_230050 N 0.718
UM02881 Ustilago maydis UM02881 N 0.718
estExt_fgeneshPB_pg.C_20804 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_20804 N 0.718
GSTUMT00004863001 Tuber melanosporum GSTUMT00004863001 N 0.704
fgenesh1_pm.C_scaffold_1000789 Pleurotus ostreatus fgenesh1_pm.C_scaffold_1000789 N 0.704