ppa006722m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa006722m T58378_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa006722m RRM 104 174

Links

Other RRM family RBPs
Other Prunus persica RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30169.m006358 Ricinus communis 30169.m006358 N 0.803
RNPS1 Arabidopsis thaliana AT1G16610-TAIR-G N 0.761
BGIOSIBCE005072 Oryza indica BGIOSIBCE005072 N 0.732
BGIOSIBCE017247 Oryza indica BGIOSIBCE017247 N 0.718
BRADI2G39730 Brachypodium distachyon BRADI2G39730 N 0.732
BRADI2G61380 Brachypodium distachyon BRADI2G61380 N 0.718
cassava30717.valid.m1 Manihot esculenta cassava30717.valid.m1 N 0.817
cassava30718.valid.m1 Manihot esculenta cassava30718.valid.m1 N 0.817
cassava30719.valid.m1 Manihot esculenta cassava30719.valid.m1 N 0.817
cassava30720.valid.m1 Manihot esculenta cassava30720.valid.m1 N 0.817
cassava34023.m1 Manihot esculenta cassava34023.m1 N 0.817
cassava34024.m1 Manihot esculenta cassava34024.m1 N 0.817
estExt_fgenesh1_pm.C_350034 Physcomitrella patens estExt_fgenesh1_pm.C_350034 N 0.718
XM_002892870.1 Arabidopsis lyrata fgenesh2_kg.1__1815__AT1G16610.2 N 0.704
Glyma15g40710.1 Glycine max Glyma15g40710.1 N 0.775
GRMZM2G060540 Zea mays GRMZM2G060540 N 0.704
GRMZM2G133926 Zea mays GRMZM2G133926 N 0.732
GSVIVG00020424001 Vitis vinifera GSVIVG00020424001 N 0.831
LOC_Os01g72890 Oryza sativa LOC_Os01g72890 N 0.732
LOC_Os05g01540 Oryza sativa LOC_Os05g01540 N 0.718
MDP0000257660 Malus x domestica MDP0000257660 N 0.930
MDP0000286005 Malus x domestica MDP0000286005 N 0.915
mgf001217m Mimulus guttatus mgf001217m N 0.746
PK27218.1 Cannabis sativa PK27218.1 N 0.845
A9PFW8_POPTR Populus trichocarpa POPTR_0011s14630 N 0.873
ppa006711m Prunus persica ppa006711m N 1.000
SB03G046480 Sorghum bicolor Sb03g046480 N 0.718