30169.m006358 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 30169.m006358 T48776_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
30169.m006358 RRM 112 182

Links

Other RRM family RBPs
Other Ricinus communis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00020424001 Vitis vinifera GSVIVG00020424001 N 0.915
cassava34024.m1 Manihot esculenta cassava34024.m1 N 0.887
cassava30717.valid.m1 Manihot esculenta cassava30717.valid.m1 N 0.887
cassava34023.m1 Manihot esculenta cassava34023.m1 N 0.887
A9PFW8_POPTR Populus trichocarpa POPTR_0011s14630 N 0.887
cassava30718.valid.m1 Manihot esculenta cassava30718.valid.m1 N 0.887
cassava30720.valid.m1 Manihot esculenta cassava30720.valid.m1 N 0.887
cassava30719.valid.m1 Manihot esculenta cassava30719.valid.m1 N 0.887
Glyma15g40710.1 Glycine max Glyma15g40710.1 N 0.859
MDP0000257660 Malus x domestica MDP0000257660 N 0.831
RNPS1 Arabidopsis thaliana AT1G16610-TAIR-G N 0.817
BGIOSIBCE005072 Oryza indica BGIOSIBCE005072 N 0.817
LOC_Os01g72890 Oryza sativa LOC_Os01g72890 N 0.817
MDP0000286005 Malus x domestica MDP0000286005 N 0.817
SB03G046480 Sorghum bicolor Sb03g046480 N 0.803
ppa006722m Prunus persica ppa006722m N 0.803
ppa006711m Prunus persica ppa006711m N 0.803
XM_002892870.1 Arabidopsis lyrata fgenesh2_kg.1__1815__AT1G16610.2 N 0.789
GRMZM2G133926 Zea mays GRMZM2G133926 N 0.789
BRADI2G39730 Brachypodium distachyon BRADI2G39730 N 0.789
PK27218.1 Cannabis sativa PK27218.1 N 0.789
BGIOSIBCE017247 Oryza indica BGIOSIBCE017247 N 0.775
estExt_fgenesh1_pm.C_350034 Physcomitrella patens estExt_fgenesh1_pm.C_350034 N 0.775
BRADI2G61380 Brachypodium distachyon BRADI2G61380 N 0.775
estExt_fgenesh1_pg.C_1180104 Physcomitrella patens estExt_fgenesh1_pg.C_1180104 N 0.775
LOC_Os05g01540 Oryza sativa LOC_Os05g01540 N 0.775
GRMZM2G060540 Zea mays GRMZM2G060540 N 0.761
mgf001217m Mimulus guttatus mgf001217m N 0.732
Glyma08g18310.1 Glycine max Glyma08g18310.1 N 0.711