CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TP03_0334
(
Theileria parva
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TP03_0334
T58810_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TP03_0334
RRM
55
125
LFVCKLNPVTEEKDLKIIFSRFGNVKSCDIIKDYVTGDSLQYAFIEFETEESCNEAYFKMQNVLIDDRRLS
Links
Other
RRM
family RBPs
Other
Theileria parva
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
83285
Helobdella robusta
83285
N
0.704
AAEL005541
Aedes aegypti
AAEL005541
N
0.718
AAEL005690
Aedes aegypti
AAEL005690
N
0.718
AGAP008136
Anopheles gambiae
AGAP008136
N
0.704
Aqu1.223583
Amphimedon queenslandica
Aqu1.223583
N
0.718
CAOG_07850
Capsaspora owczarzaki
CAOG_07850
N
0.718
cgd8_2350
Cryptosporidium parvum
cgd8_2350
N
0.718
Chro.80276
Cryptosporidium hominis
Chro.80276
N
0.718
CPIJ000912
Culex quinquefasciatus
CPIJ000912
N
0.704
CpipJ_CPIJ000912
Culex pipiens
CpipJ_CPIJ000912
N
0.704
EDO07903.1
Babesia bovis
EDO07903.1
N
0.789
PPIL4
Anolis carolinensis
ENSACAG00000006936
N
0.704
ENSCING00000006773
Ciona intestinalis
ENSCING00000006773
I
0.704
PPIL4
Cavia porcellus
ENSCPOG00000014614
N
0.704
ENSCSAVG00000010619
Ciona savignyi
ENSCSAVG00000010619
N
0.704
ppil4
Danio rerio
ENSDARG00000043854
N
0.718
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.718
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.718
PPIL4
Monodelphis domestica
ENSMODG00000016825
N
0.704
ENSOANG00000001063
Ornithorhynchus anatinus
ENSOANG00000001063
N
0.718
PPIL4
Oryzias latipes
ENSORLG00000015310
N
0.718
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.718
PPIL4
Tetraodon nigroviridis
ENSTNIG00000002706
N
0.704
PPIL4
Takifugu rubripes
ENSTRUG00000006670
N
0.718
ppil4
Xenopus tropicalis
ENSXETG00000021385
N
0.718
estExt_fgenesh3_pm.C_240021
Chlorella NC64A
estExt_fgenesh3_pm.C_240021
N
0.718
estExt_fgeneshCV_pg.C_40316
Chlorella vulgaris
estExt_fgeneshCV_pg.C_40316
N
0.718
estExt_Genewise1Plus.C_61472
Cryphonectria parasitica
estExt_Genewise1Plus.C_61472
N
0.704
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.704
e_gw1.4.423.1
Coccomyxa C 169
e_gw1.4.423.1
N
0.718
GF18772
Drosophila ananassae
FBgn0095789
N
0.718
GH18460
Drosophila grimshawi
FBgn0125927
N
0.718
GI24038
Drosophila mojavensis
FBgn0146761
N
0.718
GL13859
Drosophila persimilis
FBgn0151464
N
0.718
GJ23668
Drosophila virilis
FBgn0210765
N
0.718
GA26948-RA
Drosophila pseudoobscura
FBgn0248319
N
0.718
PF08_0086
Plasmodium falciparum
PF08_0086
N
0.761
PHUM268300
Pediculus humanus
PHUM268300
N
0.732
PVX_123145
Plasmodium vivax
PVX_123145
N
0.704
TA03990
Theileria annulata
TA03990
N
0.958
XP_001180629.1
Strongylocentrotus purpuratus
XP_001180629.1
N
0.732
XP_001192414.1
Strongylocentrotus purpuratus
XP_001192414.1
N
0.732
XP_782627.2
Strongylocentrotus purpuratus
XP_782627.2
N
0.732
XP_787384.2
Strongylocentrotus purpuratus
XP_787384.2
N
0.732