CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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cgd8_2350
(
Cryptosporidium parvum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
cgd8_2350
T46426_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
cgd8_2350
RRM
234
302
LFVCKLNPVTQDDDLELIFSRFGEVKSCNIIRDYKTGDSLQYAFIEFETKQQCEMAFLKMQNAVIDDRR
Links
Other
RRM
family RBPs
Other
Cryptosporidium parvum
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chro.80276
Cryptosporidium hominis
Chro.80276
N
1.000
MGG_10681
Magnaporthe oryzae
MGG_10681
N
0.746
estExt_Genewise1Plus.C_61472
Cryphonectria parasitica
estExt_Genewise1Plus.C_61472
N
0.746
PTSG_07932
Salpingoeca rosetta
PTSG_07932
N
0.732
ENSCING00000006773
Ciona intestinalis
ENSCING00000006773
I
0.718
ppil4
Xenopus tropicalis
ENSXETG00000021385
N
0.718
SJAG_00470
Schizosaccharomyces japonicus
SJAG_00470
N
0.718
e_gw1.11.236.1
Trichoderma atroviride
e_gw1.11.236.1
N
0.718
FVEG_11166
Fusarium verticillioides
FVEG_11166
N
0.718
estExt_fgenesh2_pm.C_1170007
Branchiostoma floridae
estExt_fgenesh2_pm.C_1170007
N
0.718
GF18772
Drosophila ananassae
FBgn0095789
N
0.718
GH18460
Drosophila grimshawi
FBgn0125927
N
0.718
NCU10166
Neurospora crassa
NCU10166
N
0.718
PHUM268300
Pediculus humanus
PHUM268300
N
0.718
GA26948-RA
Drosophila pseudoobscura
FBgn0248319
N
0.718
GJ23668
Drosophila virilis
FBgn0210765
N
0.718
GI24038
Drosophila mojavensis
FBgn0146761
N
0.718
GL13859
Drosophila persimilis
FBgn0151464
N
0.718
FOXG_13736
Fusarium oxysporum
FOXG_13736
N
0.718
SOCG_02586
Schizosaccharomyces octosporus
SOCG_02586
N
0.718
fgenesh1_pm.C_scaffold_3000471
Trichoderma virens
fgenesh1_pm.C_scaffold_3000471
N
0.718
gw1.1.256.1
Neurospora tetrasperma
gw1.1.256.1
N
0.718
estExt_Genewise1Plus.C_12820
Neurospora discreta
estExt_Genewise1Plus.C_12820
N
0.718
Pa_2_13850
Podospora anserina
Pa_2_13850
N
0.718
TP03_0334
Theileria parva
TP03_0334
N
0.718
fgenesh1_pm.C_scaffold_9000117
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_9000117
N
0.718
CHGG_06839
Chaetomium globosum
CHGG_06839
N
0.718
estExt_GeneWisePlus.C_270056
Trichoderma reesei
estExt_GeneWisePlus.C_270056
N
0.718
cyp6
Schizosaccharomyces pombe
SPBC17G9.05
N
0.704
PPIL4
Takifugu rubripes
ENSTRUG00000006670
N
0.704
PPIL4
Tetraodon nigroviridis
ENSTNIG00000002706
N
0.704
BGIBMGA008977
Bombyx mori
BGIBMGA008977
N
0.704
PPIL4
Oryzias latipes
ENSORLG00000015310
N
0.704
fgenesh1_pm.sca_11_chr8_3_0000173
Nectria haematococca
fgenesh1_pm.sca_11_chr8_3_0000173
N
0.704
estExt_Genewise1Plus.C_chr_40303
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_40303
N
0.704
EDO07903.1
Babesia bovis
EDO07903.1
N
0.704
PPIL4
Cavia porcellus
ENSCPOG00000014614
N
0.704
estExt_Genewise1Plus.C_40228
Batrachochytrium dendrobatidis
estExt_Genewise1Plus.C_40228
N
0.704
SPOG_01415
Schizosaccharomyces cryophilus
SPOG_01415
N
0.704
ARB_04672
Arthroderma benhamiae
ARB_04672
N
0.704
MGYG_05886
Microsporum gypseum
MGYG_05886
N
0.704
MCYG_06073
Microsporum canis
MCYG_06073
N
0.704
TEQG_07016
Trichophyton equinum
TEQG_07016
N
0.704
TERG_06028
Trichophyton rubrum
TERG_06028
N
0.704
FGSG_04479
Fusarium graminearum
FGSG_04479
N
0.704
ENSCSAVG00000010619
Ciona savignyi
ENSCSAVG00000010619
N
0.704
ATEG_01850
Aspergillus terreus
CADATEAG00001841
N
0.704
ANIA_09095
Aspergillus nidulans
CADANIAG00009519
N
0.704
TRV_03115
Trichophyton verrucosum
TRV_03115
N
0.704
PPIL4
Monodelphis domestica
ENSMODG00000016825
N
0.704