U2AF1 (Pan troglodytes)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSPTRG00000013952 T00601_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000006938 CCCH ZF 13 39
ENSPTRP00000006938 RRM 83 141
ENSPTRP00000006938 CCCH ZF 149 175
ENSPTRP00000024015 CCCH ZF 13 39
ENSPTRP00000024015 RRM 83 141
ENSPTRP00000024015 CCCH ZF 149 175
ENSPTRP00000059229 RRM 10 68
ENSPTRP00000059229 CCCH ZF 76 102

Links

Other CCCH ZF,RRM family RBPs
Other Pan troglodytes RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG24692 Caenorhabditis briggsae CBG24692 N 0.000
CJA05236 Caenorhabditis japonica CJA05236 N 0.000
CJA09176 Caenorhabditis japonica CJA09176 N 0.000
CJA10241 Caenorhabditis japonica CJA10241 N 0.000
CJA17831 Caenorhabditis japonica CJA17831 N 0.000
CJA28475 Caenorhabditis japonica CJA28475 N 0.000
dct-10 Caenorhabditis elegans Y38H6C.5 N 0.000