unk (Danio rerio)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDARG00000000935 T02431_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000000966 CCCH ZF 108 128
ENSDARP00000000966 CCCH ZF 310 336
ENSDARP00000096263 CCCH ZF 108 128
ENSDARP00000096263 CCCH ZF 310 336

Links

Other CCCH ZF family RBPs
Other Danio rerio RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH46725 Xenopus laevis AAH46725 N 0.860
UNK Pteropus vampyrus ENSPVAG00000008460 N 0.840
UNK Pan troglodytes ENSPTRG00000009656 N 0.840
ENSPPYG00000008637 Pongo pygmaeus ENSPPYG00000008637 N 0.840
ENSPPYG00000006950 Pongo pygmaeus ENSPPYG00000006950 N 0.750
UNK Procavia capensis ENSPCAG00000004504 N 0.820
UNKL Oryzias latipes ENSORLG00000005070 N 0.765
UNK Ochotona princeps ENSOPRG00000012784 N 0.760
UNK Oryctolagus cuniculus ENSOCUG00000014994 N 0.840
Unk Mus musculus ENSMUSG00000020770 N 0.820
Unkl Mus musculus ENSMUSG00000015127 N 0.800
UNKL Monodelphis domestica ENSMODG00000016188 N 0.784
UNK Monodelphis domestica ENSMODG00000007684 N 0.840
D4A564_RAT Rattus norvegicus ENSRNOG00000006600 N 0.840
RGD1565247 Rattus norvegicus ENSRNOG00000017598 N 0.784
UNK Sus scrofa ENSSSCG00000017201 N 0.840
Ame_R007986 Ailuropoda melanoleuca Ame_R007986 N 0.840
estExt_Genewise1.C_sca_750115 Lottia gigantea estExt_Genewise1.C_sca_750115 N 0.760
e_gw.394.2.1 Branchiostoma floridae e_gw.394.2.1 N 0.720
SNAPOd2T00019464001 Oikopleura dioica SNAPOd2T00019464001 N 0.760
PHUM219250 Pediculus humanus PHUM219250 N 0.740
unk Xenopus tropicalis ENSXETG00000012578 N 0.840
UNK Tursiops truncatus ENSTTRG00000015890 N 0.820
UNKL Takifugu rubripes ENSTRUG00000012086 N 0.745
UNK Takifugu rubripes ENSTRUG00000007192 N 0.880
UNKL Tetraodon nigroviridis ENSTNIG00000018588 N 0.765
UNK Taeniopygia guttata ENSTGUG00000008279 N 0.840
UNK Spermophilus tridecemlineatus ENSSTOG00000013344 N 0.840
UNK Macaca mulatta ENSMMUG00000013646 N 0.840
UNK Myotis lucifugus ENSMLUG00000015453 N 0.820
Unk Dipodomys ordii ENSDORG00000008133 N 0.840
UNKL Danio rerio ENSDARG00000037838 N 0.765
UNK Cavia porcellus ENSCPOG00000012679 N 0.840
UNKL Cavia porcellus ENSCPOG00000011846 N 0.784
LOC100390502 Callithrix jacchus ENSCJAG00000014056 N 0.840
UNKL Callithrix jacchus ENSCJAG00000013151 N 0.769
UNK_CANFA Canis familiaris ENSCAFG00000004925 N 0.840
A1A4K6_BOVIN Bos taurus ENSBTAG00000016287 N 0.840
UNKL Bos taurus ENSBTAG00000014126 N 0.731
UNK Anolis carolinensis ENSACAG00000007303 N 0.840
AGAP000684 Anopheles gambiae AGAP000684 N 0.765
LOC100067623 Equus caballus ENSECAG00000010641 N 0.750
UNK Equus caballus ENSECAG00000024672 N 0.840
UNK Felis catus ENSFCAG00000005757 N 0.824
UNKL Meleagris gallopavo ENSMGAG00000006920 N 0.765
UNK Meleagris gallopavo ENSMGAG00000004713 N 0.840
UNK Macropus eugenii ENSMEUG00000004094 N 0.840
UNK Loxodonta africana ENSLAFG00000022662 N 0.840
UNKL Loxodonta africana ENSLAFG00000018262 N 0.784
UNKL Gorilla gorilla ENSGGOG00000014915 N 0.750
UNK Gorilla gorilla ENSGGOG00000009203 N 0.840
UNKL Gallus gallus ENSGALG00000006450 N 0.765
UNK Gallus gallus ENSGALG00000002278 N 0.840
UNK Gasterosteus aculeatus ENSGACG00000005102 N 0.846
UNK Homo sapiens ENSG00000132478 N 0.840
UNKL Homo sapiens ENSG00000059145 N 0.750
AAEL012456 Aedes aegypti AAEL012456 N 0.780