LOC_Os11g27700 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os11g27700 T12413_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os11g27700.1 CCHC ZF 57 69

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CpipJ_CPIJ011536 Culex pipiens CpipJ_CPIJ011536 N 0.000
GI10695 Drosophila mojavensis FBgn0133459 N 0.000
GL23974 Drosophila persimilis FBgn0161564 N 0.000
GM25920 Drosophila sechellia FBgn0180776 N 0.000
GD20486 Drosophila simulans FBgn0191957 N 0.000
GJ23113 Drosophila virilis FBgn0210215 N 0.000
GK13337 Drosophila willistoni FBgn0215346 N 0.000
GE24428 Drosophila yakuba FBgn0241545 N 0.000
PHUM596900 Pediculus humanus PHUM596900 N 0.000
estExt_fgenesh1_pm.C_1020006 Daphnia pulex estExt_fgenesh1_pm.C_1020006 N 0.000
GH19060 Drosophila grimshawi FBgn0126527 N 0.000
GG17035 Drosophila erecta FBgn0109263 N 0.000
GF17370 Drosophila ananassae FBgn0094388 N 0.000
amel4_ncbi_hmm13002 Apis mellifera amel4_ncbi_hmm13002 N 0.000
nasonia_NCBI_hmm138813 Nasonia vitripennis nasonia_NCBI_hmm138813 N 0.000
AAEL005049 Aedes aegypti AAEL005049 N 0.000
AAEL005515 Aedes aegypti AAEL005515 N 0.000
AGAP000399 Anopheles gambiae AGAP000399 N 0.000
AGAP006668 Anopheles gambiae AGAP006668 N 0.000
CPIJ011536 Culex quinquefasciatus CPIJ011536 N 0.000
GA14206-RA Drosophila pseudoobscura FBgn0074235 N 0.000
sqd Drosophila melanogaster FBgn0086897 N 0.000
BGIBMGA013464 Bombyx mori BGIBMGA013464 N 0.000