LOC_Os11g39950 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os11g39950 T12446_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os11g39950.1 CCHC ZF 630 647

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Genemark.4174_g Serpula lacrymans Genemark.4174_g N 0.722
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 1.000
LOC_Os11g18620 Oryza sativa LOC_Os11g18620 N 0.944
LOC_Os11g03250 Oryza sativa LOC_Os11g03250 N 0.778
LOC_Os10g28930 Oryza sativa LOC_Os10g28930 N 0.778
LOC_Os10g17170 Oryza sativa LOC_Os10g17170 N 0.722
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 1.000
LOC_Os09g08750 Oryza sativa LOC_Os09g08750 N 0.778
LOC_Os09g08340 Oryza sativa LOC_Os09g08340 N 0.722
LOC_Os08g23510 Oryza sativa LOC_Os08g23510 N 0.722
LOC_Os07g33500 Oryza sativa LOC_Os07g33500 N 0.722
LOC_Os07g30430 Oryza sativa LOC_Os07g30430 N 0.778
LOC_Os07g26220 Oryza sativa LOC_Os07g26220 N 0.778
LOC_Os11g21830 Oryza sativa LOC_Os11g21830 N 0.944
LOC_Os11g23244 Oryza sativa LOC_Os11g23244 N 0.944
Genemark.10729_g Serpula lacrymans Genemark.10729_g N 0.722
LOC_Os12g43230 Oryza sativa LOC_Os12g43230 N 0.722
LOC_Os12g43179 Oryza sativa LOC_Os12g43179 N 0.944
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 1.000
LOC_Os12g28690 Oryza sativa LOC_Os12g28690 N 0.944
LOC_Os12g26790 Oryza sativa LOC_Os12g26790 N 0.778
LOC_Os12g23060 Oryza sativa LOC_Os12g23060 N 0.778
LOC_Os12g18320 Oryza sativa LOC_Os12g18320 N 0.944
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 1.000
LOC_Os11g30860 Oryza sativa LOC_Os11g30860 N 0.778
LOC_Os11g27050 Oryza sativa LOC_Os11g27050 N 0.778
LOC_Os11g24000 Oryza sativa LOC_Os11g24000 N 0.889
LOC_Os07g20330 Oryza sativa LOC_Os07g20330 N 0.778
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 1.000
LOC_Os03g59810 Oryza sativa LOC_Os03g59810 N 0.778
LOC_Os03g56530 Oryza sativa LOC_Os03g56530 N 0.722
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 1.000
LOC_Os03g05850 Oryza sativa LOC_Os03g05850 N 0.722
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 1.000
LOC_Os02g34450 Oryza sativa LOC_Os02g34450 N 0.778
LOC_Os02g04940 Oryza sativa LOC_Os02g04940 N 0.722
LOC_Os01g63080 Oryza sativa LOC_Os01g63080 N 0.722
LOC_Os01g52000 Oryza sativa LOC_Os01g52000 N 0.722
LOC_Os01g34250 Oryza sativa LOC_Os01g34250 N 0.722
LOC_Os01g25679 Oryza sativa LOC_Os01g25679 N 0.778
LOC_Os01g23200 Oryza sativa LOC_Os01g23200 N 0.722
LOC_Os04g04550 Oryza sativa LOC_Os04g04550 N 0.722
LOC_Os04g05710 Oryza sativa LOC_Os04g05710 N 0.722
LOC_Os07g16000 Oryza sativa LOC_Os07g16000 N 0.778
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 1.000
LOC_Os07g05430 Oryza sativa LOC_Os07g05430 N 0.722
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 1.000
LOC_Os06g24960 Oryza sativa LOC_Os06g24960 N 0.778
LOC_Os05g29120 Oryza sativa LOC_Os05g29120 N 0.722
LOC_Os04g48660 Oryza sativa LOC_Os04g48660 N 0.889
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 1.000
LOC_Os04g18750 Oryza sativa LOC_Os04g18750 N 0.722
LOC_Os04g11310 Oryza sativa LOC_Os04g11310 N 0.778
LOC_Os04g07510 Oryza sativa LOC_Os04g07510 N 0.778
LOC_Os04g05730 Oryza sativa LOC_Os04g05730 N 0.778
LOC_Os01g19100 Oryza sativa LOC_Os01g19100 N 0.778