CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GD11271
(
Drosophila simulans
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0183021
T19960_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0209673
KH
122
205
SQRVLVPIREHPKFNFVGKLLGPKGNSLRRLQEETLCKMTVLGRNSMRDRVKEEELRSSKDPKYAHLNSDLHVEISTIAPPAEA
Links
Other
KH
family RBPs
Other
Drosophila simulans
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.786
GI20563
Drosophila mojavensis
FBgn0143299
N
0.705
GL11428
Drosophila persimilis
FBgn0149037
N
0.988
GM15914
Drosophila sechellia
FBgn0170830
N
0.705
GM21780
Drosophila sechellia
FBgn0176658
N
1.000
GJ19910
Drosophila virilis
FBgn0207052
N
0.716
GJ20374
Drosophila virilis
FBgn0207514
N
0.976
GK17902
Drosophila willistoni
FBgn0219901
N
0.716
GK20819
Drosophila willistoni
FBgn0222815
N
0.701
GK22901
Drosophila willistoni
FBgn0224863
N
0.988
GE11667
Drosophila yakuba
FBgn0229463
N
1.000
GE13991
Drosophila yakuba
FBgn0231623
N
0.705
GI18580
Drosophila mojavensis
FBgn0141319
N
0.976
GH21401
Drosophila grimshawi
FBgn0128863
N
0.976
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.713
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.759
AAEL009694
Aedes aegypti
AAEL009694
N
0.739
qkr54B
Drosophila melanogaster
FBgn0022987
N
1.000
CG10384
Drosophila melanogaster
FBgn0034731
N
0.705
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.988
GF11894
Drosophila ananassae
FBgn0088934
N
0.716
GF13124
Drosophila ananassae
FBgn0090157
N
1.000
GG20683
Drosophila erecta
FBgn0112870
N
1.000
GG21049
Drosophila erecta
FBgn0113232
N
0.705
GH21368
Drosophila grimshawi
FBgn0128830
N
0.716
BGIBMGA014155
Bombyx mori
BGIBMGA014155
N
0.750