CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BGIBMGA014155
(
Bombyx mori
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
BGIBMGA014155
T21511_0.6
SilkDB (2008-Apr-11)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA014155
KH
98
185
TVKVLVPIKEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLDPKYSHLADDLHVEISAIAPPAEAHARI
Links
Other
KH
family RBPs
Other
Bombyx mori
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.830
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.795
GJ19910
Drosophila virilis
FBgn0207052
N
0.784
GK17902
Drosophila willistoni
FBgn0219901
N
0.784
CpipJ_CPIJ014324
Culex pipiens
CpipJ_CPIJ014324
N
0.784
GH21368
Drosophila grimshawi
FBgn0128830
N
0.784
CPIJ014324
Culex quinquefasciatus
CPIJ014324
N
0.784
GF11894
Drosophila ananassae
FBgn0088934
N
0.761
GD11271
Drosophila simulans
FBgn0183021
N
0.750
GM21780
Drosophila sechellia
FBgn0176658
N
0.750
GM15914
Drosophila sechellia
FBgn0170830
N
0.750
GJ20374
Drosophila virilis
FBgn0207514
N
0.750
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.750
GE13991
Drosophila yakuba
FBgn0231623
N
0.750
GE11667
Drosophila yakuba
FBgn0229463
N
0.750
GK22901
Drosophila willistoni
FBgn0224863
N
0.750
GL11428
Drosophila persimilis
FBgn0149037
N
0.750
GI20563
Drosophila mojavensis
FBgn0143299
N
0.750
GG20683
Drosophila erecta
FBgn0112870
N
0.750
GF13124
Drosophila ananassae
FBgn0090157
N
0.750
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.750
qkr54B
Drosophila melanogaster
FBgn0022987
N
0.750
CG10384
Drosophila melanogaster
FBgn0034731
N
0.750
GI18580
Drosophila mojavensis
FBgn0141319
N
0.750
GH21401
Drosophila grimshawi
FBgn0128863
N
0.750
GG21049
Drosophila erecta
FBgn0113232
N
0.750
GA10291-RA
Drosophila pseudoobscura
FBgn0070349
N
0.739
AAEL009694
Aedes aegypti
AAEL009694
N
0.739
GD11672
Drosophila simulans
FBgn0183412
N
0.716