CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF11894
(
Drosophila ananassae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0088934
T19823_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0115086
KH
18
100
VPVRDHPKFNFVGKLLGPKGNSMKRLQEDTMCKMAVLGRGSMRDRRKEEELRASGDSRYAHLFEDLHVEISTIAAPAEAHARI
Links
Other
KH
family RBPs
Other
Drosophila ananassae
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GI20563
Drosophila mojavensis
FBgn0143299
N
0.988
GE13991
Drosophila yakuba
FBgn0231623
N
0.976
CG10384
Drosophila melanogaster
FBgn0034731
N
0.976
GM15914
Drosophila sechellia
FBgn0170830
N
0.976
GG21049
Drosophila erecta
FBgn0113232
N
0.976
GA10291-RA
Drosophila pseudoobscura
FBgn0070349
N
0.964
GJ19910
Drosophila virilis
FBgn0207052
N
0.943
GH21368
Drosophila grimshawi
FBgn0128830
N
0.943
GK17902
Drosophila willistoni
FBgn0219901
N
0.920
GD11672
Drosophila simulans
FBgn0183412
N
0.852
AAEL009694
Aedes aegypti
AAEL009694
N
0.851
nasonia_NCBI_hmm272534
Nasonia vitripennis
nasonia_NCBI_hmm272534
N
0.761
BGIBMGA014155
Bombyx mori
BGIBMGA014155
N
0.761
DGIL_AUG5s14032g4t1
Acyrtosiphon pisum
DGIL_AUG5s14032g4t1
N
0.739
amel4_ncbi_hmm3083
Apis mellifera
amel4_ncbi_hmm3083
N
0.727
qkr54B
Drosophila melanogaster
FBgn0022987
N
0.716
GD11271
Drosophila simulans
FBgn0183021
N
0.716
GH21401
Drosophila grimshawi
FBgn0128863
N
0.716
GG20683
Drosophila erecta
FBgn0112870
N
0.716
GA18453-RA
Drosophila pseudoobscura
FBgn0078455
N
0.716
GL11428
Drosophila persimilis
FBgn0149037
N
0.716
GF13124
Drosophila ananassae
FBgn0090157
N
0.716
GM21780
Drosophila sechellia
FBgn0176658
N
0.716
GK22901
Drosophila willistoni
FBgn0224863
N
0.716
GE11667
Drosophila yakuba
FBgn0229463
N
0.716
GJ20374
Drosophila virilis
FBgn0207514
N
0.716
GI18580
Drosophila mojavensis
FBgn0141319
N
0.716
CpipJ_CPIJ014324
Culex pipiens
CpipJ_CPIJ014324
N
0.713
CPIJ014324
Culex quinquefasciatus
CPIJ014324
N
0.713