CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PNPT1
(
Procavia capensis
)
KH,S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
PF00575 (S1)
IPR018111
IPR003029
ENSPCAG00000010806
T22376_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000010165
KH
551
608
VETVQVPLAKRAKFVGPGGYNLRKLQAETGVTISQVDEETFSVFAPTPSAMHEARDFI
ENSPCAP00000010165
S1
619
694
QLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDHRKIRHPSALGLEVGQEIQVKYFGRDPADGRMRLSRK
Links
Other
KH,S1
family RBPs
Other
Procavia capensis
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM18_BOVIN
Bos taurus
ENSBTAG00000016367
N
0.000
RBM18
Otolemur garnettii
ENSOGAG00000015104
N
0.000
RBM18
Ochotona princeps
ENSOPRG00000010381
N
0.000
RBM18
Procavia capensis
ENSPCAG00000011245
N
0.000
ENSPPYG00000019569
Pongo pygmaeus
ENSPPYG00000019569
N
0.000
RBM18
Pan troglodytes
ENSPTRG00000021323
N
0.000
RBM18
Pteropus vampyrus
ENSPVAG00000000863
N
0.000
Rbm18
Rattus norvegicus
ENSRNOG00000006763
N
0.000
RBM18
Sus scrofa
ENSSSCG00000005531
N
0.000
RBM18
Tupaia belangeri
ENSTBEG00000016520
N
0.000
RBM18
Vicugna pacos
ENSVPAG00000008618
N
0.000
rbm18
Xenopus tropicalis
ENSXETG00000016328
N
0.000
Ame_R003783
Ailuropoda melanoleuca
Ame_R003783
N
0.000
AAH81007
Xenopus laevis
AAH81007
N
0.000
RBM18
Oryctolagus cuniculus
ENSOCUG00000008527
N
0.000
RBM18
Ornithorhynchus anatinus
ENSOANG00000008200
N
0.000
Rbm18
Mus musculus
ENSMUSG00000026889
N
0.000
RBM18
Canis familiaris
ENSCAFG00000020274
N
0.000
RBM18
Choloepus hoffmanni
ENSCHOG00000001341
N
0.000
LOC100393108
Callithrix jacchus
ENSCJAG00000020116
N
0.000
RBM18
Cavia porcellus
ENSCPOG00000013811
N
0.000
LOC100067544
Equus caballus
ENSECAG00000024639
N
0.000
RBM18
Echinops telfairi
ENSETEG00000009832
N
0.000
RBM18
Felis catus
ENSFCAG00000011188
N
0.000
RBM18
Homo sapiens
ENSG00000119446
N
0.000
RBM18
Gallus gallus
ENSGALG00000001339
N
0.000
RBM18
Gorilla gorilla
ENSGGOG00000011052
N
0.000
RBM18
Loxodonta africana
ENSLAFG00000012134
N
0.000
RBM18
Macaca mulatta
ENSMMUG00000011455
N
0.000
RBM18
Monodelphis domestica
ENSMODG00000019688
N
0.000
Q66J99
Xenopus laevis
Q66J99
N
0.000